Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 U8.8-201ENST00000365399 135 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 RNU1-138P-201ENST00000384093 164 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 TAS2R15P-201ENST00000390674 928 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 MIR708-201ENST00000390708 88 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 AC002524.1-201ENST00000411687 547 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.68□□□□□ -2.14
CACNA1AO00555 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.68□□□□□ -2.14
CACNA1AO00555 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.68□□□□□ -2.14
CACNA1AO00555 AMD1P1-201ENST00000457220 922 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.68□□□□□ -2.14
CACNA1AO00555 AC008885.2-201ENST00000509506 930 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 AF186190.1-201ENST00000517470 480 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 IMMP1LP2-201ENST00000552954 492 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.68□□□□□ -2.14
CACNA1AO00555 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC1.68□□□□□ -2.14
CACNA1AO00555 AL449363.1-201ENST00000617815 186 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 MTCO1P7-201ENST00000419523 1542 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 AC008669.1-201ENST00000565823 2178 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.68□□□□□ -2.14
CACNA1AO00555 RNU6-1080P-201ENST00000383982 107 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 RNU2-20P-201ENST00000410425 191 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 FABP5P3-201ENST00000437960 408 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 AL078601.1-201ENST00000444542 271 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 AL589765.3-201ENST00000446084 462 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 AC092185.1-201ENST00000491371 97 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 TTC39CP1-201ENST00000512513 755 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.67□□□□□ -2.14
CACNA1AO00555 AC093331.1-201ENST00000521474 169 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CACNA1AO00555 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.67□□□□□ -2.14
CACNA1AO00555 MIR8087-201ENST00000612745 78 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 AC002546.1-201ENST00000588041 2504 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 MTND4P31-201ENST00000425607 1343 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.67□□□□□ -2.14
CACNA1AO00555 AC233728.2-201ENST00000425348 757 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 ZNF965P-201ENST00000432501 817 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 AC109471.1-201ENST00000511631 612 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.67□□□□□ -2.14
CACNA1AO00555 AC092851.1-201ENST00000535964 478 ntBASIC1.67□□□□□ -2.14
CACNA1AO00555 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.67□□□□□ -2.14
CACNA1AO00555 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.67□□□□□ -2.14
CACNA1AO00555 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CACNA1AO00555 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CACNA1AO00555 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CACNA1AO00555 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CACNA1AO00555 RNU6-670P-201ENST00000364312 104 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 RNU6-174P-201ENST00000410406 106 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.66□□□□□ -2.14
CACNA1AO00555 Z95118.1-201ENST00000421372 247 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 AL591212.2-201ENST00000433923 257 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 COX6CP14-201ENST00000469580 174 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.66□□□□□ -2.14
CACNA1AO00555 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.66□□□□□ -2.14
CACNA1AO00555 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.66□□□□□ -2.14
CACNA1AO00555 RMST_6.1-201ENST00000611980 203 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
CACNA1AO00555 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CACNA1AO00555 SNORD114-27-201ENST00000363766 70 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 AIMP1P2-201ENST00000425294 312 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
CACNA1AO00555 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.66□□□□□ -2.14
CACNA1AO00555 AC068305.1-201ENST00000497406 726 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
CACNA1AO00555 COX6CP5-201ENST00000527162 228 ntBASIC1.66□□□□□ -2.14
CACNA1AO00555 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CACNA1AO00555 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CACNA1AO00555 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.66□□□□□ -2.14
CACNA1AO00555 RNA5SP502-201ENST00000362694 119 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.65□□□□□ -2.15
CACNA1AO00555 AL365400.1-201ENST00000431854 640 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 snoU13.3-201ENST00000459441 104 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.65□□□□□ -2.15
CACNA1AO00555 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 AC011492.1-201ENST00000600023 315 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 AL161912.3-201ENST00000605404 628 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 AC007742.2-201ENST00000618226 398 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 VN1R7P-201ENST00000619242 903 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 AC241377.1-201ENST00000619797 406 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CACNA1AO00555 SNORA51.10-201ENST00000384418 136 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 RNA5SP266-201ENST00000410273 108 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.65□□□□□ -2.15
CACNA1AO00555 FAM157A-202ENST00000615155 405 ntBASIC1.65□□□□□ -2.15
CACNA1AO00555 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.64□□□□□ -2.15
CACNA1AO00555 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
CACNA1AO00555 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CACNA1AO00555 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.64□□□□□ -2.15
CACNA1AO00555 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CACNA1AO00555 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.64□□□□□ -2.15
CACNA1AO00555 MIR5002-201ENST00000584713 97 ntBASIC1.64□□□□□ -2.15
CACNA1AO00555 AC146944.4-201ENST00000602697 718 ntBASIC1.64□□□□□ -2.15
CACNA1AO00555 AC080078.3-201ENST00000605407 463 ntBASIC1.64□□□□□ -2.15
CACNA1AO00555 AC013562.2-201ENST00000611632 603 ntBASIC1.64□□□□□ -2.15
CACNA1AO00555 AC116447.1-201ENST00000613153 453 ntBASIC1.64□□□□□ -2.15
CACNA1AO00555 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.64□□□□□ -2.15
CACNA1AO00555 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.64□□□□□ -2.15
CACNA1AO00555 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CACNA1AO00555 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms