Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC28A1O00337 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC28A1O00337 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SLC28A1O00337 AC011611.1-201ENST00000552179 197 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC28A1O00337 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC28A1O00337 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC28A1O00337 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC28A1O00337 AL354943.1-201ENST00000572103 781 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 AC006130.2-201ENST00000586202 326 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC28A1O00337 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC28A1O00337 VN1R92P-201ENST00000598511 928 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 AL139418.1-201ENST00000613613 177 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 AC009464.1-201ENST00000615731 469 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SLC28A1O00337 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC28A1O00337 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC28A1O00337 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC28A1O00337 SDAD1P2-201ENST00000441308 2028 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 RPL21P132-201ENST00000331267 462 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AL672167.1-206ENST00000356293 943 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SLC28A1O00337 RNU4-28P-201ENST00000364739 141 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 RNU6-723P-201ENST00000383973 107 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 RNU6-516P-201ENST00000411381 104 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC28A1O00337 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC28A1O00337 SDCBPP3-201ENST00000419629 891 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC28A1O00337 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC28A1O00337 RPL7L1P10-201ENST00000427790 463 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AL590383.1-201ENST00000428602 75 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AL035407.1-201ENST00000429211 571 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AC092573.2-201ENST00000434546 243 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AC091862.1-201ENST00000438016 1100 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 LSM1P1-201ENST00000438629 273 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC28A1O00337 RPS12P18-201ENST00000442381 270 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC28A1O00337 RPL21P10-201ENST00000463521 490 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC28A1O00337 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC28A1O00337 AC110794.1-201ENST00000505816 425 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SLC28A1O00337 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC28A1O00337 MTND5P4-201ENST00000514978 288 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AC110760.3-202ENST00000515177 371 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 RNU6-798P-201ENST00000516912 103 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC28A1O00337 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC28A1O00337 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC28A1O00337 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC28A1O00337 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC28A1O00337 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC28A1O00337 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC28A1O00337 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC28A1O00337 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC28A1O00337 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC28A1O00337 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC28A1O00337 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC28A1O00337 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC28A1O00337 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC28A1O00337 AC106791.2-201ENST00000604680 391 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AC105148.1-201ENST00000604961 409 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AC072039.2-201ENST00000608883 439 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AL603758.1-201ENST00000618654 241 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AC027309.3-201ENST00000623419 351 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 AL356596.1-201ENST00000624230 379 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 PCMTD1P7-201ENST00000634506 357 ntBASIC3.04□□□□□ -1.92
SLC28A1O00337 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC28A1O00337 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SLC28A1O00337 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC28A1O00337 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SLC28A1O00337 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC28A1O00337 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC28A1O00337 OR4G2P-202ENST00000641004 1759 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SLC28A1O00337 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 RNU1-33P-201ENST00000364249 162 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 SNORA36C-201ENST00000384289 132 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 MIR514A1-201ENST00000385133 98 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 MTND4P13-201ENST00000402078 1023 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 MTND1P21-201ENST00000412991 285 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 AC018630.2-202ENST00000422992 927 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC28A1O00337 AL353705.1-201ENST00000433468 480 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.03□□□□□ -1.92
SLC28A1O00337 RSU1P2-202ENST00000437884 485 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SLC28A1O00337 PDSS1P2-201ENST00000449397 678 ntBASIC3.03□□□□□ -1.92
SLC28A1O00337 AC140076.1-201ENST00000449897 361 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms