Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC125238.1-201ENST00000448842 249 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC023424.2-201ENST00000493479 777 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC097462.2-201ENST00000504623 481 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC098862.1-201ENST00000504991 413 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-1129P-201ENST00000515964 104 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 SNORA3.4-201ENST00000515969 96 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 SNORA31.20-201ENST00000517111 133 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 UBTFL10-201ENST00000528532 562 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC126177.3-201ENST00000551839 688 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AL353778.1-201ENST00000603149 408 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AL139344.1-201ENST00000605228 195 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AL607023.1-201ENST00000620045 248 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 AC011477.1-204ENST00000623416 1325 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-433P-201ENST00000363216 104 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 SNORA80A-201ENST00000363922 136 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-777P-201ENST00000364265 104 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 Y_RNA.548-201ENST00000384656 105 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AP000567.1-201ENST00000406413 156 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU2-47P-201ENST00000410649 186 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 VPS26BP1-201ENST00000417155 755 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 MTCYBP34-201ENST00000439552 670 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC002381.1-201ENST00000447049 280 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 MTND1P31-201ENST00000449206 961 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 MEMO1P3-201ENST00000459811 302 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 LTV1P1-201ENST00000510683 1237 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-1095P-201ENST00000516148 108 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 SCARNA20.6-201ENST00000517251 106 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC090136.1-201ENST00000520009 240 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 DUXAP5-201ENST00000529668 529 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 OR7K1P-201ENST00000546439 926 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC008507.1-201ENST00000587506 734 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC008751.2-201ENST00000597885 980 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AL591516.1-201ENST00000611326 274 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 AC009487.2-201ENST00000420969 6821 ntBASIC3.13□□□□□ -1.91
NEDD8-MDP1E9PL57 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-462P-201ENST00000362659 105 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 RNA5SP189-201ENST00000364920 115 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 MIR607-201ENST00000385241 96 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AL356131.1-201ENST00000405826 414 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC098592.1-201ENST00000419352 333 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC011233.1-201ENST00000422812 283 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AL022400.1-201ENST00000423946 935 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 ISCA1P2-201ENST00000438679 421 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 SDCBPP1-201ENST00000440192 890 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 Z82190.1-201ENST00000454534 490 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 RPL7P5-201ENST00000471472 736 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 RN7SKP244-201ENST00000516513 307 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms