Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 snoU13.15-201ENST00000459407 104 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 RNA5SP471-201ENST00000516971 106 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 RNU6-1073P-201ENST00000517182 106 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 EIF5A2P1-201ENST00000564027 460 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 AP003117.1-201ENST00000602771 554 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 AC025811.1-201ENST00000604312 472 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 PISRT1-201ENST00000626175 531 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 MFSD8-245ENST00000641743 948 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 AC002543.1-201ENST00000299783 1954 ntBASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
CPSF4LA6NMK7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 SNORA46.1-201ENST00000391069 153 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 RNA5SP38-201ENST00000410750 119 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 MTND4LP21-201ENST00000415303 295 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AC233981.1-201ENST00000423224 461 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 CKS1BP5-201ENST00000434172 273 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 GAPDHP39-201ENST00000481866 979 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 RPL30P11-201ENST00000495304 339 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AC021146.7-201ENST00000509604 775 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 NDUFS5P6-201ENST00000529136 295 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 CENPUP2-201ENST00000555897 1186 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 RPS15AP11-201ENST00000594193 385 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AC113194.1-201ENST00000606037 500 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AC145207.9-201ENST00000623802 325 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AC011477.1-204ENST00000623416 1325 ntBASIC1.32□□□□□ -2.2
CPSF4LA6NMK7 AC004944.1-201ENST00000517807 3059 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AP001350.1-201ENST00000601906 1524 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 RNU6-335P-201ENST00000364563 113 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AC007098.1-201ENST00000420122 367 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AL121882.1-201ENST00000422893 417 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 GTF2IP7-202ENST00000436677 309 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 WASF1P1-201ENST00000447560 1131 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 Z99714.1-201ENST00000450463 807 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AC087879.1-201ENST00000474343 374 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 FO393415.2-201ENST00000480085 343 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AC109464.2-201ENST00000510242 943 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AC008837.1-201ENST00000511513 412 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 CASP1P1-201ENST00000526345 212 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 MIR3945-201ENST00000581853 98 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 MTND4P27-201ENST00000450813 1354 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 AP005901.5-201ENST00000545779 1796 ntBASIC1.31□□□□□ -2.2
CPSF4LA6NMK7 CDC27P3-201ENST00000635418 1910 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 RNU1-62P-201ENST00000362599 164 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 RNU4-13P-201ENST00000364019 141 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 RNU6-60P-201ENST00000364792 103 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 RNU6-997P-201ENST00000384725 107 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AC098592.2-201ENST00000413158 265 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 RPL31P63-201ENST00000422565 375 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 VN1R108P-201ENST00000431580 830 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 BNIP3P2-201ENST00000441221 577 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 RPL23AP33-201ENST00000442301 452 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 snoU13.26-201ENST00000459452 105 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AC114322.1-201ENST00000506771 926 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 CIR1P1-201ENST00000524055 1133 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AL645939.4-201ENST00000604495 135 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AC108479.2-201ENST00000617314 601 ntBASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.3□□□□□ -2.2
CPSF4LA6NMK7 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms