Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC105224.1-201ENST00000587055 421 ntBASIC4.77□□□□□ -1.65
PTPDC1A2A3K4 AC104985.2-201ENST00000620598 500 ntBASIC4.77□□□□□ -1.65
PTPDC1A2A3K4 YWHAEP7-203ENST00000622054 312 ntBASIC4.77□□□□□ -1.65
PTPDC1A2A3K4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PTPDC1A2A3K4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTPDC1A2A3K4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PTPDC1A2A3K4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.77□□□□□ -1.65
PTPDC1A2A3K4 CKAP2P1-201ENST00000555477 2049 ntBASIC4.77□□□□□ -1.65
PTPDC1A2A3K4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC087190.4-201ENST00000574616 8334 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 ZNF680P1-201ENST00000436625 1469 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 RNU6-797P-201ENST00000363101 109 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 Y_RNA.381-201ENST00000365666 102 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 RNU6-1158P-201ENST00000391167 107 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 SNORA3C-201ENST00000408792 125 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AL358472.1-201ENST00000431295 329 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AL606489.2-201ENST00000433886 234 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 RPS15AP9-201ENST00000439856 381 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC069285.2-201ENST00000440210 275 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 BNIP3P2-201ENST00000441221 577 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 RPL23AP33-201ENST00000442301 452 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 RNU6-261P-201ENST00000459506 102 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 RPL29P14-201ENST00000495837 428 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 TMEM248P1-201ENST00000510579 951 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC025465.4-201ENST00000513422 638 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC046134.1-201ENST00000514454 666 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 CR383656.7-201ENST00000548164 174 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC073544.1-201ENST00000600110 1595 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 BNIP3P9-201ENST00000603714 553 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC104662.1-201ENST00000604448 511 ntBASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPDC1A2A3K4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 SNORD56.2-201ENST00000363242 71 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 Y_RNA.160-201ENST00000363677 92 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 U3.11-201ENST00000364476 212 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 MIR153-1-201ENST00000384914 90 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 MIR1-2-201ENST00000384961 85 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 RPL32P23-201ENST00000397237 405 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 RNU2-9P-201ENST00000410194 145 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 RPL21P111-201ENST00000418453 477 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AL391219.1-201ENST00000422570 483 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 RPL31P61-201ENST00000496160 376 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC008628.2-201ENST00000502605 298 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC018710.1-201ENST00000506509 158 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 SNORA40.12-201ENST00000516329 111 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 RNU6-835P-201ENST00000516974 104 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AL133271.1-201ENST00000538229 291 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AL133153.1-201ENST00000557756 303 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 HMGB3P26-201ENST00000560051 582 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 GLUD1P4-201ENST00000590914 418 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC103710.2-201ENST00000609912 942 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC104260.1-201ENST00000616660 539 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AL359314.1-201ENST00000616913 261 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC099654.5-201ENST00000636479 350 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 AL049555.1-201ENST00000562834 1933 ntBASIC4.75□□□□□ -1.65
PTPDC1A2A3K4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms