Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC110760.3-202ENST00000515177 371 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6-583P-201ENST00000516012 92 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AL163153.1-201ENST00000554223 283 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 MIR4513-201ENST00000581077 86 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 RPL23AP92-201ENST00000603609 255 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC092106.3-201ENST00000611308 722 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC021755.1-201ENST00000559747 1447 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SMIM28A0A1B0GU29 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.9□□□□□ -1.94
SMIM28A0A1B0GU29 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 AC004925.1-201ENST00000624256 2706 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 MIR513B-201ENST00000385136 84 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 COX7BP2-201ENST00000437976 242 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 OFD1P3Y-201ENST00000453312 783 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 AC096751.1-202ENST00000502691 1067 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 XKRY-201ENST00000510392 1100 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 AC116353.3-201ENST00000511215 249 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 RNU1-61P-201ENST00000516107 151 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 RNA5SP468-201ENST00000516782 93 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 HSPE1P3-201ENST00000559254 309 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 OR4K7P-201ENST00000580232 945 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 AL355812.1-201ENST00000603215 216 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 AC107294.3-201ENST00000609211 526 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 VIS1.1-201ENST00000610517 203 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 ASNSP3-201ENST00000451989 1306 ntBASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SMIM28A0A1B0GU29 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 DEFB109C-201ENST00000382575 264 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 DEFB109B-201ENST00000382656 264 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 RNU6-1122P-201ENST00000384449 107 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AC007742.1-201ENST00000425789 329 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 RPS25P9-201ENST00000435591 252 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 ELOCP26-201ENST00000436067 329 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 NECAP1P2-201ENST00000455668 727 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 MTND1P16-201ENST00000465177 898 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AC096725.1-201ENST00000514266 313 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AC093677.1-201ENST00000514414 678 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 RNU4-29P-201ENST00000515943 174 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 SNORA9.3-201ENST00000516383 129 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AC103783.1-201ENST00000520506 373 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 PDCL2P2-201ENST00000533651 189 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 MIR3186-201ENST00000577404 85 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AC004009.2-201ENST00000623016 728 ntBASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.89□□□□□ -1.95
SMIM28A0A1B0GU29 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 FTLP6-201ENST00000355274 422 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 MIR449A-201ENST00000362113 91 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 RNU6-83P-201ENST00000384568 112 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 RNU6-878P-201ENST00000384578 110 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 Y_RNA.548-201ENST00000384656 105 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 RNU4-65P-201ENST00000410473 140 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 MTCO3P12-201ENST00000416718 547 ntBASIC2.88□□□□□ -1.95
SMIM28A0A1B0GU29 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms