Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 SETP12-201ENST00000514068 805 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC027309.2-201ENST00000520566 192 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AP000889.1-201ENST00000530968 660 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AMZ2P1-203ENST00000565833 850 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC106782.4-201ENST00000568264 210 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AF131215.7-201ENST00000602443 707 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC073569.3-201ENST00000619055 682 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC027309.3-201ENST00000623419 351 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 ZNF663P-202ENST00000641770 1131 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 MTND5P11-201ENST00000511037 1812 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 NUP58P1-201ENST00000502546 1738 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 SNORA6-201ENST00000384033 151 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 UBE2V1P11-201ENST00000411559 285 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AL513331.1-201ENST00000411908 397 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 MTCO3P30-201ENST00000426425 670 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AL590623.1-201ENST00000427864 105 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC093422.3-201ENST00000428506 305 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC012497.1-201ENST00000429392 575 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 RPL31P54-201ENST00000429803 370 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 TPTE2P1-204ENST00000435256 593 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC005002.1-201ENST00000447458 540 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 NAP1L1P3-201ENST00000462291 880 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 CABYRP1-201ENST00000465493 1045 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC080014.1-201ENST00000496877 1201 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 MTCO2P9-201ENST00000503214 694 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC010486.1-201ENST00000511793 424 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 RNU6-416P-201ENST00000516265 103 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 RNU1-103P-201ENST00000516502 125 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 RNA5SP364-201ENST00000516938 78 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 LSM6P2-201ENST00000552208 177 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 ANP32BP3-201ENST00000559213 706 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 HMGB1P6-201ENST00000569046 646 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC090616.3-201ENST00000582184 217 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 RPS15AP11-201ENST00000594193 385 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC012443.1-201ENST00000605605 231 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 VN1R74P-201ENST00000613259 503 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC009159.1-201ENST00000618386 642 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC009318.4-201ENST00000620496 486 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 AC068880.5-201ENST00000624331 290 ntBASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV1-1A0A0B4J248 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 RNA5SP160-201ENST00000364866 120 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 SET-203ENST00000372688 801 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AL513475.1-201ENST00000406602 315 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 BOLA3P4-201ENST00000418151 400 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 RPL27AP8-201ENST00000424277 446 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC025750.2-201ENST00000442609 450 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AP000936.2-201ENST00000447151 681 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC008427.1-201ENST00000503102 655 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC113155.1-201ENST00000511141 769 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 RNA5SP24-201ENST00000516478 95 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC103833.1-201ENST00000517442 172 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 COX6CP8-201ENST00000522620 226 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 IGJP1-201ENST00000522682 475 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 CASP1P1-201ENST00000526345 212 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 EIF4BP1-201ENST00000554881 351 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC009127.3-201ENST00000570531 403 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 SNORD39.3-201ENST00000584451 71 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AL020997.3-201ENST00000602843 359 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AL356280.1-201ENST00000603614 379 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC009314.1-201ENST00000603871 304 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC010738.1-201ENST00000604970 987 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC245884.12-201ENST00000615364 59 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 AC007998.5-201ENST00000622938 237 ntBASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms