Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AL590704.1-201ENST00000402856 794 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 MIR1911-201ENST00000410783 80 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 RNU4-6P-201ENST00000410804 122 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC127391.1-201ENST00000411737 98 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AL691449.1-201ENST00000426570 421 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 RPL31P35-201ENST00000431058 377 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AL445584.1-201ENST00000431451 330 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 MTND4LP10-201ENST00000435146 291 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC104850.1-201ENST00000435940 476 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AL136380.1-201ENST00000447970 162 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC010587.1-201ENST00000505809 469 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 MTND3P22-201ENST00000510932 243 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC010493.1-201ENST00000513479 292 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 Vault.3-201ENST00000516676 95 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 CENPUP1-201ENST00000526649 1202 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 MIR3146-201ENST00000580367 79 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AL133173.2-201ENST00000614270 90 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AL159972.1-201ENST00000625150 448 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC244517.1-201ENST00000606030 2086 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC006026.1-201ENST00000444025 1803 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 AC016588.2-201ENST00000632484 3021 ntBASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC187A0A096LP49 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.96□□□□□ -1.77
CCDC187A0A096LP49 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.96□□□□□ -1.77
CCDC187A0A096LP49 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC187A0A096LP49 AC116667.1-201ENST00000604855 2072 ntBASIC3.96□□□□□ -1.77
CCDC187A0A096LP49 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 Y_RNA.9-201ENST00000362354 101 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 RNU5E-1-201ENST00000362477 120 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 RNY4P14-201ENST00000363656 96 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 RNU6-1078P-201ENST00000364522 103 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 SNORA70.4-201ENST00000365509 134 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 MIR449B-201ENST00000384995 97 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 RNU6-1009P-201ENST00000390996 107 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AL603766.1-201ENST00000407763 664 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 HMGN1P24-201ENST00000412282 298 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 EI24P1-201ENST00000416584 867 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 MTND3P17-201ENST00000416968 344 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC133104.1-201ENST00000429100 218 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC119618.1-201ENST00000434191 222 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 RAC1P7-201ENST00000445367 377 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 C1DP4-201ENST00000455429 424 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 ARL4AP2-201ENST00000507378 601 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 RNU6-358P-201ENST00000516564 75 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC123904.3-201ENST00000547218 814 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 UBE2V2P2-201ENST00000587677 504 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC010928.3-201ENST00000587712 541 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AL049634.3-201ENST00000604968 457 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC009268.2-201ENST00000621925 457 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 C2orf27A-204ENST00000623058 969 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AP003122.6-201ENST00000623831 495 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AC138649.5-201ENST00000637456 137 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 CASC19-280ENST00000642102 1351 ntBASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms