Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 SNORA64.1-201ENST00000362600 132 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-595P-201ENST00000363944 107 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 Y_RNA.237-201ENST00000364439 102 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 Y_RNA.352-201ENST00000365439 102 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-886P-201ENST00000384319 105 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 MIR1286-201ENST00000408112 78 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-712P-201ENST00000410558 100 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AC092573.2-201ENST00000434546 243 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 RN7SL799P-201ENST00000475891 298 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AC098869.1-201ENST00000481627 292 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 RPL32P33-201ENST00000487023 394 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AC007016.1-201ENST00000512110 244 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 SNORA31.22-201ENST00000517204 135 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AMZ2P1-203ENST00000565833 850 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 MIR5696-201ENST00000578474 85 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AC123912.5-201ENST00000605470 343 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 MIR6837-201ENST00000620884 64 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 CU639417.4-201ENST00000623928 207 ntBASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB11Q9Y5F2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AP000560.1-201ENST00000624150 1937 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AL391987.6-201ENST00000305671 199 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-1179P-201ENST00000384667 107 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 RNA5SP91-201ENST00000390902 119 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 MTCO2P33-201ENST00000402100 465 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AP000275.1-201ENST00000411943 390 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 SDAD1P3-201ENST00000427380 333 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AL159987.2-201ENST00000432754 307 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 CFL1P1-202ENST00000432948 411 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 RANP8-201ENST00000444720 713 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 REG1CP-206ENST00000447469 496 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-1037P-201ENST00000459571 107 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 RN7SL515P-201ENST00000463999 297 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 CR383656.1-201ENST00000484916 377 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 RPS15AP34-201ENST00000487776 387 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 RN7SL184P-201ENST00000488308 297 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 RNU4-71P-201ENST00000516258 113 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 RN7SKP234-201ENST00000517173 224 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AC008489.1-201ENST00000524271 483 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AC008814.1-201ENST00000603797 406 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 AC009962.1-201ENST00000567327 3813 ntBASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB11Q9Y5F2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms