Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SNORD35B-201ENST00000363660 87 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 RNVU1-3-201ENST00000364313 161 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 RNU6-867P-201ENST00000364956 107 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 RNU6-1207P-201ENST00000384343 107 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 MIR1277-201ENST00000408536 78 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 SNORA3.3-201ENST00000408712 125 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 RNA5SP44-201ENST00000410446 133 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 RNU4-55P-201ENST00000410731 137 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC078974.1-201ENST00000411597 223 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AL159169.1-201ENST00000421119 127 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC127537.2-201ENST00000439258 465 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 NOTCH2P1-201ENST00000443481 624 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AL500522.2-201ENST00000448562 343 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC079448.1-201ENST00000449377 373 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 BX276092.4-201ENST00000452056 248 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 RN7SL585P-201ENST00000470538 280 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC114967.1-201ENST00000504890 259 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 ARL2BPP6-201ENST00000512757 439 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 RNU7-143P-201ENST00000516781 65 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AP003181.2-201ENST00000528941 181 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 RPL23AP87-202ENST00000573039 466 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AL049634.3-201ENST00000604968 457 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 SNORA51-201ENST00000606420 132 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AL161734.1-201ENST00000609720 557 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 AC019226.1-201ENST00000625666 515 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 MIR3688-2-201ENST00000636963 87 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 FAM91A3P-201ENST00000456826 2544 ntBASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SSX2IPQ9Y2D8 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.28□□□□□ -1.73
SSX2IPQ9Y2D8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.28□□□□□ -1.73
SSX2IPQ9Y2D8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 RNU6-97P-201ENST00000363387 104 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 Y_RNA.234-201ENST00000364409 97 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 RNU1-89P-201ENST00000384592 164 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 RN7SKP156-201ENST00000410308 342 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC017083.1-201ENST00000428093 483 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC073464.1-201ENST00000429823 534 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 MTCYBP45-201ENST00000435243 565 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC108734.1-201ENST00000439549 399 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC023598.1-201ENST00000472521 361 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 RPL23AP41-201ENST00000484754 458 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 MIR2114-201ENST00000516645 80 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 NRON-201ENST00000517270 370 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 FAM92A1P1-201ENST00000528023 890 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AL845331.3-202ENST00000562856 261 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC099489.2-201ENST00000574976 260 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC006504.3-201ENST00000586818 523 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AL009028.1-201ENST00000604895 802 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC010680.4-201ENST00000605334 543 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 AC011816.2-201ENST00000607089 556 ntBASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SSX2IPQ9Y2D8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC024560.2-201ENST00000507981 1497 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RNY4P14-201ENST00000363656 96 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 Y_RNA.256-201ENST00000364594 104 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 SNORD6-201ENST00000365444 73 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RNU6-359P-201ENST00000365466 108 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms