Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RN7SKP114-201ENST00000410327 279 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NOD1Q9Y239 AL591212.2-201ENST00000433923 257 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 RPS20P1-201ENST00000434853 354 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 AC090774.1-201ENST00000435925 246 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 AL353752.1-201ENST00000454946 260 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 RNU7-138P-201ENST00000459479 64 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 RPL37P6-201ENST00000460682 294 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 AC022133.1-201ENST00000490961 571 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 SLC25A15P5-201ENST00000508033 253 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 RN7SKP234-201ENST00000517173 224 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 AP000827.1-201ENST00000527814 258 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 AC022882.1-201ENST00000532142 501 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 MIR4270-201ENST00000581799 70 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 AC025857.2-201ENST00000602711 238 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NOD1Q9Y239 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NOD1Q9Y239 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 ABCC13-202ENST00000463099 3842 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 STX3-208ENST00000641815 3236 ntBASIC5.74□□□□□ -1.49
NOD1Q9Y239 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NOD1Q9Y239 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NOD1Q9Y239 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.74□□□□□ -1.49
NOD1Q9Y239 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 SOCS5P3-201ENST00000425115 1576 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 AC093849.1-201ENST00000563631 2209 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 Y_RNA.151-201ENST00000363566 112 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 RNA5SP87-201ENST00000384155 118 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 SNORA66-201ENST00000384792 133 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 SSXP9-201ENST00000417503 292 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 RPS24P13-201ENST00000442520 397 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 AC112492.4-201ENST00000456549 352 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 RPL9P32-201ENST00000464118 620 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 RPL31P60-201ENST00000478450 367 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 AC008897.1-201ENST00000494006 347 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 COX6B1P5-201ENST00000509843 249 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 RAB9BP1-201ENST00000519581 626 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 AC131281.1-201ENST00000522984 164 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 AC022616.4-201ENST00000522985 181 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 ERHP1-201ENST00000523006 310 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 ELOCP5-201ENST00000604924 333 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 AL731566.2-201ENST00000618971 317 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 MIR6810-201ENST00000622701 70 ntBASIC5.73□□□□□ -1.49
NOD1Q9Y239 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
NOD1Q9Y239 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
NOD1Q9Y239 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NOD1Q9Y239 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NOD1Q9Y239 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NOD1Q9Y239 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NOD1Q9Y239 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NOD1Q9Y239 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 RNU6-817P-201ENST00000391083 104 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 PPIAP9-201ENST00000403866 498 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 PPP1R11P2-201ENST00000423543 382 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 AC011816.1-201ENST00000441346 546 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 AC112498.1-201ENST00000444401 332 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 KNOP1P3-201ENST00000446933 426 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 FTH1P25-201ENST00000447665 469 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 RPS11P1-201ENST00000451072 473 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms