Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC093155.1-201ENST00000440164 826 ntBASIC3.22□□□□□ -1.89
SMC3Q9UQE7 AC079203.1-201ENST00000487972 404 ntBASIC3.22□□□□□ -1.89
SMC3Q9UQE7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.22□□□□□ -1.89
SMC3Q9UQE7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMC3Q9UQE7 AC010376.1-201ENST00000522101 334 ntBASIC3.22□□□□□ -1.89
SMC3Q9UQE7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.22□□□□□ -1.89
SMC3Q9UQE7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.22□□□□□ -1.89
SMC3Q9UQE7 MTCO3P13-201ENST00000577757 781 ntBASIC3.22□□□□□ -1.89
SMC3Q9UQE7 SRGNP1-201ENST00000603392 451 ntBASIC3.22□□□□□ -1.89
SMC3Q9UQE7 AL035411.2-201ENST00000604022 421 ntBASIC3.22□□□□□ -1.89
SMC3Q9UQE7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.22□□□□□ -1.89
SMC3Q9UQE7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMC3Q9UQE7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SMC3Q9UQE7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.21□□□□□ -1.9
SMC3Q9UQE7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.21□□□□□ -1.9
SMC3Q9UQE7 RNU6-657P-201ENST00000383904 107 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 RNU6-224P-201ENST00000384055 107 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 MIR493-201ENST00000385254 89 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 SNORD65.1-201ENST00000390889 71 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 MTCO2P23-201ENST00000425216 680 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AL451062.2-201ENST00000427515 271 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 SUMO1P4-201ENST00000429430 302 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 HSFY7P-201ENST00000432672 318 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.21□□□□□ -1.9
SMC3Q9UQE7 HSFY8P-201ENST00000437934 318 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AL671855.1-201ENST00000446875 1203 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AL589880.1-201ENST00000448271 287 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC009961.3-201ENST00000449832 765 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AL009048.1-201ENST00000450437 298 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC079776.3-201ENST00000450665 370 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 HSFY5P-201ENST00000453726 309 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.21□□□□□ -1.9
SMC3Q9UQE7 PNPLA4P1-201ENST00000458328 305 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 RPS29P26-201ENST00000477483 171 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC069528.1-202ENST00000482888 637 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC113420.1-201ENST00000507903 571 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC117522.3-201ENST00000507974 584 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 RNU6-276P-201ENST00000516114 96 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC091163.3-201ENST00000518269 1144 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC118942.1-201ENST00000529674 1035 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.21□□□□□ -1.9
SMC3Q9UQE7 BNIP3P27-201ENST00000599991 412 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC091057.3-201ENST00000602684 733 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AL137843.1-201ENST00000605078 385 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC112220.2-201ENST00000605513 533 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC012443.1-201ENST00000605605 231 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC022306.3-201ENST00000619930 550 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 AC013437.2-201ENST00000639587 677 ntBASIC3.21□□□□□ -1.9
SMC3Q9UQE7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.21□□□□□ -1.9
SMC3Q9UQE7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 RNA5SP171-201ENST00000391071 115 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 RPL35AP12-201ENST00000425362 338 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 RPL23AP74-201ENST00000437246 471 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 SDR42E1P3-201ENST00000438345 502 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AC234775.1-201ENST00000454247 670 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 Z82190.1-201ENST00000454534 490 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AP001992.1-205ENST00000462248 379 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 RNA5SP341-201ENST00000516261 117 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 SNORA70.16-201ENST00000516390 95 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 RN7SKP40-201ENST00000517211 242 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 RN7SKP57-201ENST00000517248 293 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AL022099.1-201ENST00000604551 712 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AC008277.2-201ENST00000605196 797 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AC024560.3-201ENST00000608482 349 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AP001521.1-201ENST00000609150 300 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AC010975.3-201ENST00000618727 978 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 AL356585.4-201ENST00000623078 1229 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 FO624990.1-201ENST00000636373 85 ntBASIC3.2□□□□□ -1.9
SMC3Q9UQE7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.2□□□□□ -1.9
SMC3Q9UQE7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 Y_RNA.408-201ENST00000383987 102 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 MIR627-201ENST00000384979 97 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 MIR506-201ENST00000384998 124 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AL356057.2-201ENST00000403318 432 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms