Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 BEND7P1-201ENST00000422058 457 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 AL121871.1-201ENST00000443413 436 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 FGF7P3-201ENST00000454645 303 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 MEMO1P3-201ENST00000459811 302 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 MTND2P14-201ENST00000482139 351 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 AC093278.1-201ENST00000494700 600 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 SNORA3.4-201ENST00000515969 96 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 RNA5SP216-201ENST00000516111 123 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 BBIP1P1-201ENST00000602999 279 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 AC093424.1-201ENST00000604999 338 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 AL390208.1-201ENST00000605885 644 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 AC090425.2-201ENST00000608818 501 ntBASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.8□□□□□ -1.48
SHROOM4Q9ULL8 AL161781.1-201ENST00000354277 403 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 RPL7P25-201ENST00000404151 721 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 DUTP6-201ENST00000425573 462 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 TOMM20P4-201ENST00000427861 435 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 HMGB1P12-201ENST00000438594 598 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 Z82190.1-201ENST00000454534 490 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AP003461.1-201ENST00000528866 78 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AC011602.1-201ENST00000546484 331 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AL031281.1-201ENST00000604049 488 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AC021755.4-201ENST00000616620 456 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AC008993.2-201ENST00000631744 806 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AP006437.1-201ENST00000641440 3685 ntBASIC5.79□□□□□ -1.48
SHROOM4Q9ULL8 AC008725.1-201ENST00000605123 2263 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 RNU6-50P-201ENST00000362356 103 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 SNORA67.4-201ENST00000384688 142 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 RSL24D1P4-201ENST00000400938 484 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 RNA5SP129-201ENST00000410276 118 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 RPL7P8-201ENST00000411964 730 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 NPM1P11-201ENST00000417106 855 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 PTP4A1P5-201ENST00000420305 455 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AL137014.1-201ENST00000420490 1226 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AC010099.3-201ENST00000423896 409 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 MTND5P14-201ENST00000441481 1267 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 BX322784.1-201ENST00000455793 1077 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AP001086.1-201ENST00000494882 321 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AC141257.3-201ENST00000572906 215 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 VN1R90P-201ENST00000595717 726 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AL136981.2-201ENST00000617319 734 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 AL590808.1-201ENST00000618696 141 ntBASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC5.78□□□□□ -1.48
SHROOM4Q9ULL8 OR1S2-201ENST00000302592 978 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 SNORA4.1-201ENST00000364263 144 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AC083875.1-201ENST00000419509 405 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 Z99127.3-201ENST00000448158 395 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 PAXBP1P1-201ENST00000449315 447 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 RPL23AP35-201ENST00000451906 501 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 snoU13.8-201ENST00000458890 104 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 RPS4XP22-201ENST00000480755 780 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 MIR2114-201ENST00000516645 80 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 HMGB1P6-201ENST00000569046 646 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AL596327.1-201ENST00000603629 213 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AC007619.2-201ENST00000605743 379 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AL355810.1-201ENST00000614629 552 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms