Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU6-1155P-201ENST00000363554 107 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 RNU6-1188P-201ENST00000363795 107 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 RNA5SP505-201ENST00000364748 108 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 SNORD116-11-201ENST00000383882 92 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 RPS23P10-201ENST00000416185 486 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 ATG3P1-201ENST00000419507 911 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 PMCHL1-202ENST00000423102 261 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AL138785.1-201ENST00000425821 331 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 MTND3P2-201ENST00000438452 342 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AL137792.2-201ENST00000443484 235 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 RPL32P28-201ENST00000443577 397 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC112498.1-201ENST00000444401 332 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC079140.5-201ENST00000507882 310 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC093303.1-201ENST00000514549 295 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 RNU6-273P-201ENST00000516937 96 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC090115.3-201ENST00000553218 849 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 MIR1254-2-201ENST00000579553 63 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 MIR5096-201ENST00000583713 70 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC012669.1-201ENST00000603209 283 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC174048.1-201ENST00000603389 144 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC108738.1-201ENST00000603703 237 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC136443.5-201ENST00000603741 370 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC009570.1-201ENST00000609599 745 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC012409.4-201ENST00000612923 249 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 AC007998.5-201ENST00000622938 237 ntBASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AL139811.1-201ENST00000424779 2299 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 RN7SKP224-201ENST00000364140 325 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 RN7SKP227-201ENST00000364445 330 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 SNORA22B-201ENST00000383876 138 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 Y_RNA.482-201ENST00000384377 111 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 SNORA66-201ENST00000384792 133 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 GLULP6-201ENST00000399502 913 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AL445189.1-201ENST00000405722 338 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 RNU6-954P-201ENST00000411355 107 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 BX682237.1-201ENST00000415016 335 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AL139396.1-201ENST00000421137 167 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC005019.1-201ENST00000436455 431 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AL590399.6-201ENST00000446396 307 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 RPS24P16-201ENST00000497294 392 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 HIGD1AP13-201ENST00000509878 289 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 OR7H2P-201ENST00000513483 306 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC027369.5-201ENST00000533838 755 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 SNRPGP18-201ENST00000553000 214 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC016925.2-201ENST00000605108 242 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC022893.3-201ENST00000607665 437 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AL138726.1-201ENST00000614873 333 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC244517.12-201ENST00000623581 663 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 MTND5P42-201ENST00000637720 498 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 AC073869.8-201ENST00000641806 335 ntBASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.23□□□□□ -1.73
CDC42EP3Q9UKI2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms