Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC109315.1-201ENST00000584143 1347 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 RNU6-1180P-201ENST00000364935 107 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AL031679.1-201ENST00000400616 525 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 RNU2-15P-201ENST00000410692 191 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 RPL19P1-201ENST00000411635 428 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 MTATP6P11-201ENST00000428071 670 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AL050341.1-201ENST00000447743 313 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AC108938.1-201ENST00000451204 136 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 RPL32P14-201ENST00000463196 378 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 MTND2P31-201ENST00000512602 616 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 RNU6-237P-201ENST00000515985 71 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 HSPE1P20-201ENST00000538133 289 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AC008127.2-201ENST00000549925 1075 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 SULT1C2P1-202ENST00000562418 459 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AC009097.3-201ENST00000563557 1018 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AC011260.1-201ENST00000578420 472 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AP002906.1-201ENST00000603405 233 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AC007619.2-201ENST00000605743 379 ntBASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
CTNNA3Q9UI47 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 OR1L1-202ENST00000373686 1083 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 FCF1P2-201ENST00000415284 583 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AC084024.2-201ENST00000503480 791 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 SEM1P1-201ENST00000506694 209 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 RNA5SP135-201ENST00000517019 125 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AC128657.1-201ENST00000549459 145 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 MIR4635-201ENST00000583759 79 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AC010620.2-201ENST00000600135 313 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AC087241.4-201ENST00000612441 480 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AL161629.2-201ENST00000615347 275 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AC107308.1-201ENST00000615897 301 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AC027309.3-201ENST00000623419 351 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AC110079.1-202ENST00000635213 138 ntBASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CTNNA3Q9UI47 AC087359.1-201ENST00000508335 1740 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 DBF4P1-201ENST00000412976 1892 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 RNU6-582P-201ENST00000362989 107 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 RNU6-1155P-201ENST00000363554 107 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 RNU6-549P-201ENST00000384433 107 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AL356320.2-201ENST00000417263 507 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 RPL17P35-201ENST00000432217 549 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 MOB1AP2-201ENST00000446060 614 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AC126389.1-201ENST00000477436 290 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AC010625.1-201ENST00000511296 403 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AC034159.1-201ENST00000513885 583 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AC096725.1-201ENST00000514266 313 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 RNU6-885P-201ENST00000516607 104 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AP003049.1-201ENST00000529418 457 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AC068339.2-201ENST00000534395 618 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 RN7SL622P-201ENST00000585292 275 ntBASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.16□□□□□ -1.9
CTNNA3Q9UI47 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms