Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RN7SL97P-201ENST00000486780 299 ntBASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 AC022493.1-201ENST00000492984 337 ntBASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 AC022080.3-201ENST00000544433 482 ntBASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 FKBP1BP1-201ENST00000553366 325 ntBASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 MIR3691-201ENST00000578066 90 ntBASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 AC123912.5-201ENST00000605470 343 ntBASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 MIR8076-201ENST00000611401 83 ntBASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 FTX_2.1-201ENST00000618816 94 ntBASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 Z75746.1-201ENST00000440243 2080 ntBASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LIMD1Q9UGP4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 Y_RNA.27-201ENST00000362540 103 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RN7SKP103-201ENST00000363848 320 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 SNORD27-201ENST00000363981 72 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RN7SKP151-201ENST00000410230 316 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RNU6-1203P-201ENST00000410703 110 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 MYL6P5-201ENST00000412707 459 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AL138785.1-201ENST00000425821 331 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RPL26P6-201ENST00000440913 438 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 PRELID3BP1-201ENST00000457142 540 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 HSPE1P6-201ENST00000479457 291 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RN7SL591P-201ENST00000496150 292 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 OR51K1P-201ENST00000510214 950 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AC008958.1-201ENST00000511047 682 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RNU1-86P-201ENST00000516108 154 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RNU1-107P-201ENST00000516617 154 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RN7SKP66-201ENST00000516681 231 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AL121603.1-201ENST00000553815 142 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AC068446.3-201ENST00000555285 382 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AC022884.2-201ENST00000578535 580 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 AL049539.1-201ENST00000611964 459 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LIMD1Q9UGP4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 AC009812.4-201ENST00000569134 1805 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 MIR412-201ENST00000362142 91 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 RNA5SP183-201ENST00000362452 119 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 U3.13-201ENST00000364804 214 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 Y_RNA.352-201ENST00000365439 102 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 SNORA56-201ENST00000383966 129 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 MIR153-1-201ENST00000384914 90 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 HNRNPCP4-201ENST00000571636 900 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 MIR4646-201ENST00000580775 63 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 AC009314.1-201ENST00000603871 304 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 MIR6820-201ENST00000611508 62 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 AC100827.5-201ENST00000615883 426 ntBASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIMD1Q9UGP4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms