Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.23□□□□□ -1.73
DKK3Q9UBP4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DKK3Q9UBP4 AC018555.1-201ENST00000567548 1980 ntBASIC4.23□□□□□ -1.73
DKK3Q9UBP4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
DKK3Q9UBP4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.23□□□□□ -1.73
DKK3Q9UBP4 AC024560.2-201ENST00000507981 1497 ntBASIC4.23□□□□□ -1.73
DKK3Q9UBP4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 FAM35DP-201ENST00000323387 2712 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 RNU1-15P-201ENST00000353977 144 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 Y_RNA.295-201ENST00000364918 102 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 RPL31P1-201ENST00000398116 372 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AL356421.1-201ENST00000403255 413 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 RNU2-41P-201ENST00000410991 178 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC012498.1-201ENST00000424037 437 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 MTND4P28-201ENST00000426217 387 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC104850.1-201ENST00000435940 476 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AP001992.1-205ENST00000462248 379 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 PLGLA-201ENST00000465668 449 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC023194.1-201ENST00000493084 308 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 RPL7P47-201ENST00000497299 556 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC093853.1-201ENST00000515689 483 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 SNORA67.7-201ENST00000516664 135 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC090615.1-201ENST00000577519 154 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 MIR3118-1-201ENST00000581787 76 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AL591034.3-201ENST00000605511 685 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC012531.5-201ENST00000611375 151 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AC092125.1-201ENST00000562568 1995 ntBASIC4.22□□□□□ -1.73
DKK3Q9UBP4 AF127577.6-201ENST00000623352 2191 ntBASIC4.21□□□□□ -1.73
DKK3Q9UBP4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
DKK3Q9UBP4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 HSPA8P1-201ENST00000425843 1833 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 Y_RNA.70-201ENST00000362886 110 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 Y_RNA.409-201ENST00000383990 98 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 RNU6-483P-201ENST00000384088 108 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 BTBD10P2-201ENST00000404779 676 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 RNA5SP317-201ENST00000410176 116 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 RNA5SP311-201ENST00000411290 116 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC127391.1-201ENST00000411737 98 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC108032.1-201ENST00000416706 207 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 OR51AB1P-201ENST00000429046 620 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 MTND4LP16-201ENST00000440828 295 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AL049734.2-201ENST00000441066 616 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 RPL23AP41-201ENST00000484754 458 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC098799.2-201ENST00000509466 868 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 RNA5SP315-201ENST00000516340 116 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 RNA5SP143-201ENST00000516936 115 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 RNA5SP312-201ENST00000517068 116 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AP003072.2-201ENST00000527756 676 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC092470.1-201ENST00000546187 132 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC123904.2-201ENST00000548059 300 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC090616.5-202ENST00000582111 297 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC024220.1-201ENST00000603675 484 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC121334.2-201ENST00000605387 271 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC008945.2-201ENST00000606056 604 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 MIR98-201ENST00000606724 119 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms