Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 TAB3P1-202ENST00000452645 1634 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 RNU1-94P-201ENST00000362627 173 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 RNU4-20P-201ENST00000365601 151 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-398P-201ENST00000384143 109 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-692P-201ENST00000384496 107 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 MIR708-201ENST00000390708 88 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AL606923.1-201ENST00000406616 190 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 RNA5SP56-201ENST00000410277 118 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 RAB28P1-201ENST00000411517 641 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 HSPE1P1-201ENST00000421494 318 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 HMGB1P18-201ENST00000438801 619 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 RPS29P15-201ENST00000458329 171 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 RPL37P6-202ENST00000464216 403 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 RPL21P99-201ENST00000480369 423 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AC135721.1-201ENST00000497954 479 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AC083829.1-201ENST00000503756 657 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AP000827.1-201ENST00000527814 258 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 MIR4703-201ENST00000577728 79 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 MIR4293-201ENST00000584305 78 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AL669831.4-202ENST00000590817 238 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AC234771.5-201ENST00000600161 514 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AL022099.1-201ENST00000604551 712 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AL031176.1-201ENST00000604554 466 ntBASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PPARGC1AQ9UBK2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PPARGC1AQ9UBK2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.65
PPARGC1AQ9UBK2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 RNU6-1029P-201ENST00000384109 107 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 RNU4-65P-201ENST00000410473 140 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 RNA5SP107-201ENST00000411358 122 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AF228730.4-201ENST00000421457 183 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 Z74021.1-201ENST00000423610 407 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AC236972.2-201ENST00000434979 310 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AC073587.1-201ENST00000447093 876 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AL121877.1-201ENST00000453704 622 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 RN7SL354P-201ENST00000469282 294 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 RPL7P23-201ENST00000493874 747 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 MTCO1P29-201ENST00000496868 288 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 FAM206BP-201ENST00000510179 541 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 RNU4-49P-201ENST00000516080 140 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.665-201ENST00000516177 98 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 DEFB108D-201ENST00000527787 222 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 HPRT1P3-201ENST00000539521 576 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AC091979.2-201ENST00000607514 214 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.812-201ENST00000610788 101 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 AC104237.2-201ENST00000612456 443 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.784-201ENST00000613803 101 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.787-201ENST00000616522 101 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.780-201ENST00000617336 101 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.801-201ENST00000619005 101 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 MIR6130-201ENST00000619419 109 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 U6.114-201ENST00000636407 96 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 EXOC5P1-201ENST00000510543 1969 ntBASIC4.71□□□□□ -1.66
PPARGC1AQ9UBK2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 MTCO1P24-201ENST00000515438 1558 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 OR56B2P-202ENST00000641377 2453 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 MTND4P14-201ENST00000435799 1354 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 RNU6-989P-201ENST00000362756 107 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 RNU6-522P-201ENST00000364497 107 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 RNA5SP505-201ENST00000364748 108 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 RNU4-66P-201ENST00000365199 138 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.384-201ENST00000383909 102 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms