Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RN7SL432P-201ENST00000484057 298 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 AC025459.1-201ENST00000504072 156 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 CBX3P3-201ENST00000508108 532 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 NDUFB4P2-201ENST00000509515 391 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 AC104057.1-201ENST00000515547 497 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 RNU2-44P-201ENST00000516795 194 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 HMGB1P46-201ENST00000520062 610 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 AL442163.2-201ENST00000553912 710 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 MIR3117-201ENST00000584034 78 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 BNIP3P33-201ENST00000598912 569 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 AC013468.1-201ENST00000608680 598 ntBASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.72□□□□□ -2.13
COMMD3Q9UBI1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC016716.1-201ENST00000265882 708 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 SNORA68.1-201ENST00000364537 132 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 RNU6-1074P-201ENST00000383995 104 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 RNA5SP354-201ENST00000391247 136 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 RNA5SP184-201ENST00000411071 108 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 RNU4-74P-201ENST00000411280 161 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 CYCSP32-201ENST00000440548 321 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC108938.1-201ENST00000451204 136 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 RNA5SP233-201ENST00000459153 113 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 RN7SKP31-201ENST00000516354 278 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC025857.1-201ENST00000525252 377 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 CYCSP26-201ENST00000534107 320 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 GLYCAM1-201ENST00000546596 285 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 EIF5A2P1-201ENST00000564027 460 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC234778.2-201ENST00000566241 354 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 MIR5089-201ENST00000580047 84 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC079089.3-201ENST00000603094 673 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC135507.2-201ENST00000612443 309 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 UCA1.1-201ENST00000620952 75 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 CTSLP2-204ENST00000629029 392 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 AC009950.2-201ENST00000636548 183 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 MTND4P35-201ENST00000604257 1375 ntBASIC1.71□□□□□ -2.14
COMMD3Q9UBI1 RNU6-386P-201ENST00000362650 107 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 RNU1-105P-201ENST00000363470 161 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 RNU1-91P-201ENST00000364746 163 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 RNU6-198P-201ENST00000384258 104 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 RNU6-1226P-201ENST00000384317 107 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 MIR17-201ENST00000385012 84 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 RNU6-712P-201ENST00000410558 100 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 AC010385.1-201ENST00000412374 256 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 AL139156.1-201ENST00000412785 841 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 ARL2BPP3-201ENST00000421226 480 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 NUP35P1-201ENST00000422734 947 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 RPL7P44-201ENST00000424827 742 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 EZH2P1-201ENST00000431167 291 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 NDUFB4P6-201ENST00000436819 366 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 AL109933.2-201ENST00000452651 260 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 EIF4EP3-201ENST00000498782 656 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 AC097462.2-201ENST00000504623 481 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 SLC25A15P5-201ENST00000508033 253 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 AC008885.2-201ENST00000509506 930 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 AC016550.3-201ENST00000515706 767 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 MED28P6-201ENST00000558776 231 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 FAM60BP-201ENST00000578364 658 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 AP001521.1-201ENST00000609150 300 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 MIR7106-201ENST00000612419 65 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 AC010378.1-201ENST00000619270 362 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 MTND2P41-201ENST00000637599 773 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 MFSD8-245ENST00000641743 948 ntBASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COMMD3Q9UBI1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 FAM133CP-201ENST00000332869 704 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 MIR208A-201ENST00000362287 71 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 SNORA48.2-201ENST00000390926 124 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 RNU6-821P-201ENST00000390995 107 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 SNORD23.1-201ENST00000408212 104 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 EIF1AXP1-201ENST00000419267 435 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms