Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNU6-826P-201ENST00000516827 104 ntBASIC1.56□□□□□ -2.16
CHD7Q9P2D1 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CHD7Q9P2D1 AC017076.1-201ENST00000607613 578 ntBASIC1.56□□□□□ -2.16
CHD7Q9P2D1 AC091895.1-201ENST00000624494 256 ntBASIC1.56□□□□□ -2.16
CHD7Q9P2D1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD7Q9P2D1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
CHD7Q9P2D1 RNY1P4-201ENST00000384595 115 ntBASIC1.56□□□□□ -2.16
CHD7Q9P2D1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD7Q9P2D1 TPMTP3-201ENST00000411928 735 ntBASIC1.56□□□□□ -2.16
CHD7Q9P2D1 AC027673.1-201ENST00000456245 405 ntBASIC1.56□□□□□ -2.16
CHD7Q9P2D1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.56□□□□□ -2.16
CHD7Q9P2D1 RNA5SP38-201ENST00000410750 119 ntBASIC1.56□□□□□ -2.16
CHD7Q9P2D1 RPL7P53-201ENST00000421245 739 ntBASIC1.56□□□□□ -2.16
CHD7Q9P2D1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD7Q9P2D1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 AL137100.2-201ENST00000555786 315 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 AC008568.2-201ENST00000623862 2313 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 AC114973.1-201ENST00000429057 632 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 AL591704.1-201ENST00000432574 275 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 USP9YP7-201ENST00000436723 430 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 USP9YP32-201ENST00000452432 430 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 AC004223.1-201ENST00000479840 271 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 AC109446.2-201ENST00000567872 497 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 CDC27P3-201ENST00000635418 1910 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 WWP1P1-201ENST00000466609 2769 ntBASIC1.55□□□□□ -2.16
CHD7Q9P2D1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHD7Q9P2D1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CHD7Q9P2D1 AL445669.1-201ENST00000426743 755 ntBASIC1.54□□□□□ -2.16
CHD7Q9P2D1 COX6CP14-201ENST00000469580 174 ntBASIC1.54□□□□□ -2.16
CHD7Q9P2D1 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.54□□□□□ -2.16
CHD7Q9P2D1 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
CHD7Q9P2D1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.54□□□□□ -2.16
CHD7Q9P2D1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.54□□□□□ -2.16
CHD7Q9P2D1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.54□□□□□ -2.16
CHD7Q9P2D1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.54□□□□□ -2.16
CHD7Q9P2D1 AC007375.1-201ENST00000554513 578 ntBASIC1.54□□□□□ -2.16
CHD7Q9P2D1 TRAV28-201ENST00000557548 323 ntBASIC1.54□□□□□ -2.16
CHD7Q9P2D1 AL121917.1-203ENST00000605534 577 ntBASIC1.54□□□□□ -2.16
CHD7Q9P2D1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.54□□□□□ -2.16
CHD7Q9P2D1 AC012321.1-201ENST00000561622 1588 ntBASIC1.54□□□□□ -2.16
CHD7Q9P2D1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.53□□□□□ -2.16
CHD7Q9P2D1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.53□□□□□ -2.16
CHD7Q9P2D1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.53□□□□□ -2.16
CHD7Q9P2D1 RPS3AP22-201ENST00000488297 769 ntBASIC1.53□□□□□ -2.16
CHD7Q9P2D1 AL031274.2-201ENST00000599419 203 ntBASIC1.53□□□□□ -2.16
CHD7Q9P2D1 AL158801.5-201ENST00000623123 465 ntBASIC1.53□□□□□ -2.16
CHD7Q9P2D1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHD7Q9P2D1 Y_RNA.251-201ENST00000364551 99 ntBASIC1.53□□□□□ -2.16
CHD7Q9P2D1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.53□□□□□ -2.16
CHD7Q9P2D1 MTCYBP45-201ENST00000435243 565 ntBASIC1.53□□□□□ -2.16
CHD7Q9P2D1 GTF2IP7-202ENST00000436677 309 ntBASIC1.53□□□□□ -2.16
CHD7Q9P2D1 AC098799.2-201ENST00000509466 868 ntBASIC1.53□□□□□ -2.16
CHD7Q9P2D1 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.53□□□□□ -2.16
CHD7Q9P2D1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.53□□□□□ -2.16
CHD7Q9P2D1 OR4K8P-201ENST00000578842 1048 ntBASIC1.53□□□□□ -2.16
CHD7Q9P2D1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.53□□□□□ -2.16
CHD7Q9P2D1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.53□□□□□ -2.16
CHD7Q9P2D1 SRIP3-201ENST00000413200 219 ntBASIC1.53□□□□□ -2.17
CHD7Q9P2D1 RPL17P12-201ENST00000413391 526 ntBASIC1.53□□□□□ -2.17
CHD7Q9P2D1 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.53□□□□□ -2.17
CHD7Q9P2D1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.53□□□□□ -2.17
CHD7Q9P2D1 MIR3618-201ENST00000580330 88 ntBASIC1.53□□□□□ -2.17
CHD7Q9P2D1 BNIP3P4-201ENST00000604946 565 ntBASIC1.53□□□□□ -2.17
CHD7Q9P2D1 AL592494.3-201ENST00000609485 464 ntBASIC1.53□□□□□ -2.17
CHD7Q9P2D1 STMN1P1-201ENST00000617809 440 ntBASIC1.53□□□□□ -2.17
CHD7Q9P2D1 AC008121.3-201ENST00000618726 433 ntBASIC1.53□□□□□ -2.17
CHD7Q9P2D1 ZNF271P-202ENST00000465539 1970 ntBASIC1.52□□□□□ -2.17
CHD7Q9P2D1 SNORD114-27-201ENST00000363766 70 ntBASIC1.52□□□□□ -2.17
CHD7Q9P2D1 MIR520E-201ENST00000384867 87 ntBASIC1.52□□□□□ -2.17
CHD7Q9P2D1 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 TRIAP1P1-201ENST00000427062 225 ntBASIC1.52□□□□□ -2.17
CHD7Q9P2D1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 MIR98-201ENST00000606724 119 ntBASIC1.52□□□□□ -2.17
CHD7Q9P2D1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.52□□□□□ -2.17
CHD7Q9P2D1 AC023813.2-201ENST00000564321 469 ntBASIC1.52□□□□□ -2.17
CHD7Q9P2D1 FO624990.1-201ENST00000636373 85 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms