Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC128657.1-201ENST00000549459 145 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 RN7SL600P-201ENST00000581811 299 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC068790.6-201ENST00000602558 258 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AL136363.2-201ENST00000604173 851 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AL161729.4-201ENST00000604650 476 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC098614.4-201ENST00000607601 462 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC012531.5-201ENST00000611375 151 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 Z99129.1-201ENST00000612510 255 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC008498.1-201ENST00000613012 531 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC099842.1-201ENST00000619919 596 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC084035.1-201ENST00000634543 607 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN1Q9P244 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC008568.2-201ENST00000623862 2313 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 MIR3074-201ENST00000384885 81 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 RPS3AP36-201ENST00000398190 775 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC127391.1-201ENST00000411737 98 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 USP9YP36-201ENST00000424581 829 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 ISCA1P6-201ENST00000427740 390 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 RPL7L1P10-201ENST00000427790 463 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AL356867.1-201ENST00000429623 299 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 RAD23BP3-201ENST00000454157 1152 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 RPS20P20-201ENST00000460498 340 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AL049714.1-201ENST00000466686 347 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 RBM43P1-201ENST00000476891 1081 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 RPS29P19-201ENST00000479709 171 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AL049874.1-201ENST00000489560 388 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 KCTD9P5-201ENST00000504141 1170 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 RNU2-10P-201ENST00000516375 211 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 NRON-201ENST00000517270 370 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC090151.1-201ENST00000520784 730 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC022616.3-201ENST00000523940 148 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AP003392.2-201ENST00000527269 208 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC006130.2-201ENST00000586202 326 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC025946.2-201ENST00000603398 234 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC245014.2-201ENST00000603689 287 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC091805.2-201ENST00000603848 235 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC246785.4-201ENST00000605374 287 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 RNU4-89P-201ENST00000607443 133 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AL133173.2-201ENST00000614270 90 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC090132.2-201ENST00000615881 347 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC110801.1-201ENST00000623590 212 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC008013.2-202ENST00000637965 364 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LRFN1Q9P244 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AC090740.1-201ENST00000623193 2262 ntBASIC3.88□□□□□ -1.79
LRFN1Q9P244 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LRFN1Q9P244 AF127577.6-201ENST00000623352 2191 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN1Q9P244 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN1Q9P244 AC118273.1-201ENST00000525324 3006 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN1Q9P244 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
LRFN1Q9P244 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
LRFN1Q9P244 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN1Q9P244 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN1Q9P244 OR4G2P-202ENST00000641004 1759 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 Z82217.1-201ENST00000625157 8149 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN1Q9P244 HSPE1P11-201ENST00000339579 310 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 SNORA62.3-201ENST00000365110 153 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 RNA5SP22-201ENST00000365393 109 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 MIR554-201ENST00000384874 96 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 MIR93-201ENST00000385024 80 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 MIR670-201ENST00000390142 98 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 Y_RNA.582-201ENST00000391023 95 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 SNORD66.1-201ENST00000391230 76 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 Y_RNA.599-201ENST00000410489 109 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 RNU2-66P-201ENST00000410650 161 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 RN7SKP33-201ENST00000410942 340 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 AL356095.1-201ENST00000417217 199 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 AC004552.1-201ENST00000419089 348 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 ELOCP4-201ENST00000420090 333 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 PIGFP2-201ENST00000421400 651 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.87□□□□□ -1.79
LRFN1Q9P244 RBMY1KP-201ENST00000423480 476 ntBASIC3.87□□□□□ -1.79
LRFN1Q9P244 UBE2D3P2-201ENST00000424409 445 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms