Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 HSPE1P26-201ENST00000405341 275 ntBASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 HMGB3P2-201ENST00000411913 584 ntBASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 BNIP3P2-201ENST00000441221 577 ntBASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 HMGB3P21-201ENST00000452483 547 ntBASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 AC087441.2-201ENST00000529141 262 ntBASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 MIR4419B-201ENST00000577260 68 ntBASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 AC145207.9-201ENST00000623802 325 ntBASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 FO624990.1-201ENST00000636373 85 ntBASIC2.24□□□□□ -2.05
PHRF1Q9P1Y6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 AL391987.6-201ENST00000305671 199 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 SNORA16.1-201ENST00000364597 132 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 RNU6-53P-201ENST00000365367 106 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 POLHP1-201ENST00000411806 470 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 AL451074.3-201ENST00000437709 472 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 OR7L1P-201ENST00000456181 380 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 PPP1R2P5-201ENST00000457256 603 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 TOMM22P6-201ENST00000465035 409 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 AC090515.1-201ENST00000465295 476 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 AC012181.1-201ENST00000479895 423 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 AC012170.1-201ENST00000495139 359 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 AC090255.1-201ENST00000495779 349 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 AC109464.2-201ENST00000510242 943 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 LINC00216-201ENST00000623548 1126 ntBASIC2.23□□□□□ -2.05
PHRF1Q9P1Y6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 Y_RNA.191-201ENST00000363972 113 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 RNA5SP167-201ENST00000365461 116 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 Z98749.2-208ENST00000381646 500 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 AC069277.2-201ENST00000454211 432 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 RNU6-1218P-201ENST00000458990 108 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 AC092754.2-201ENST00000463506 460 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 AC055855.1-201ENST00000489563 579 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 RNA5SP102-201ENST00000516865 106 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 RNU6-56P-201ENST00000516986 93 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 AP004242.1-201ENST00000533701 349 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 MIR4716-201ENST00000579628 84 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 RMST_6.1-201ENST00000611980 203 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 MIR6779-201ENST00000617283 64 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 ZNF876P-202ENST00000398732 1485 ntBASIC2.22□□□□□ -2.05
PHRF1Q9P1Y6 RNA5SP295-201ENST00000362655 121 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 RNU6-697P-201ENST00000363348 107 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 MIR124-3-201ENST00000384866 87 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 RPL21P75-201ENST00000396599 483 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 RPL21P28-201ENST00000401418 483 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AL592114.1-201ENST00000403842 483 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 RNU1-123P-201ENST00000458950 160 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AC011979.1-201ENST00000472300 483 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 RPL21P93-201ENST00000480465 489 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AC069528.1-202ENST00000482888 637 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AC233702.1-201ENST00000482905 502 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AC079203.1-201ENST00000487972 404 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AC093591.1-201ENST00000491435 481 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 RPL21P16-201ENST00000495531 483 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 RNU6-347P-201ENST00000516658 105 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AC104115.2-201ENST00000523026 687 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AC068714.1-201ENST00000559623 800 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 MIR4421-201ENST00000578133 69 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 AC131280.1-202ENST00000624067 4211 ntBASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
PHRF1Q9P1Y6 SNORD48-201ENST00000364953 64 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 RNU6-167P-201ENST00000384292 106 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 RPL21P1-201ENST00000399532 476 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 ARPC3P1-201ENST00000437218 533 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 HMGB1P47-201ENST00000511281 589 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 SMARCE1P4-201ENST00000523647 241 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 HPVC1-201ENST00000629899 1198 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms