Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AC024940.4-201ENST00000605507 246 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC009570.1-201ENST00000609599 745 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 AL589994.2-201ENST00000621124 579 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 MTND5P26-201ENST00000426018 1752 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX56Q9NY93 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX56Q9NY93 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX56Q9NY93 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX56Q9NY93 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX56Q9NY93 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX56Q9NY93 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX56Q9NY93 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX56Q9NY93 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 AL157831.1-201ENST00000426134 473 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC073464.1-201ENST00000429823 534 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 HMGB3P12-201ENST00000438745 556 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 RPL23AP52-201ENST00000439311 478 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 NEFMP1-201ENST00000443423 1006 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 RNA5SP310-201ENST00000459084 116 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC087588.1-201ENST00000462203 316 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC006517.1-201ENST00000480485 328 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC011825.1-201ENST00000484967 388 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC231760.1-201ENST00000498002 260 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 HMGB1P29-201ENST00000505659 499 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 MTND2P33-201ENST00000506452 1031 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC111000.3-201ENST00000508057 576 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AL592156.1-201ENST00000508758 304 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 OR51K1P-201ENST00000510214 950 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC090572.1-201ENST00000519251 160 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC022690.1-201ENST00000526681 550 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC063950.1-201ENST00000552036 308 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC174048.1-201ENST00000603389 144 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC013553.2-201ENST00000604244 589 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AL136363.1-201ENST00000605349 337 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 Mico1.1-201ENST00000611698 204 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AL592295.2-201ENST00000612578 206 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 MIR6076-201ENST00000617521 113 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC008013.2-202ENST00000637965 364 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 AL136164.4-201ENST00000625013 2135 ntBASIC4.43□□□□□ -1.7
DDX56Q9NY93 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX56Q9NY93 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
DDX56Q9NY93 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX56Q9NY93 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX56Q9NY93 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX56Q9NY93 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX56Q9NY93 RNU6-641P-201ENST00000384006 107 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 RNU6-39P-201ENST00000384344 107 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 RNU6-456P-201ENST00000384493 107 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 MIR93-201ENST00000385024 80 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 MIR513A2-201ENST00000385249 127 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 RNA5SP104-201ENST00000410989 118 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 AL356535.1-201ENST00000440335 398 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 MTND1P1-201ENST00000445453 368 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 AC132479.1-201ENST00000449160 144 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 ANP32BP2-201ENST00000454525 545 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 AC023598.1-201ENST00000472521 361 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 AC079382.1-201ENST00000493346 557 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 UBE2CP3-201ENST00000502715 450 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 AC108078.1-201ENST00000508073 725 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 SNORA70.14-201ENST00000516205 110 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 RNU6-720P-201ENST00000516363 108 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 AP006587.4-201ENST00000526053 529 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 AC034105.3-201ENST00000565294 442 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 AC104763.2-201ENST00000604179 382 ntBASIC4.42□□□□□ -1.7
DDX56Q9NY93 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX56Q9NY93 OR5AK4P-201ENST00000635912 903 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms