Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AC118282.1-201ENST00000506408 765 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AC093809.1-201ENST00000509155 340 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AC022483.1-201ENST00000514020 567 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 ZNF321P-202ENST00000550843 495 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AL391156.1-201ENST00000554965 554 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 BDH2P1-201ENST00000602288 736 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AL031281.1-201ENST00000604049 488 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AP001330.4-201ENST00000604350 154 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AL022099.1-201ENST00000604551 712 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC021755.1-201ENST00000559747 1447 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 FRG1BP-201ENST00000278882 761 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 RNU2-43P-201ENST00000410306 190 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC245291.1-201ENST00000419501 328 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 NEK4P1-201ENST00000433383 879 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 PAXBP1P1-201ENST00000449315 447 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC037471.2-201ENST00000564941 598 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC002400.1-201ENST00000569310 726 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC136618.2-201ENST00000575091 400 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AC011451.2-201ENST00000604303 598 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AL110115.1-201ENST00000614396 364 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 MIR6130-201ENST00000619419 109 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 AL136164.4-201ENST00000625013 2135 ntBASIC4.07□□□□□ -1.76
SMC4Q9NTJ3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 MTATP6P17-201ENST00000431030 672 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AL353705.1-201ENST00000433468 480 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 RPL23AP83-201ENST00000434984 473 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 MTCYBP34-201ENST00000439552 670 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 MTCO1P27-201ENST00000448269 226 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 MTND1P9-201ENST00000453775 944 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 RN7SL863P-201ENST00000462370 296 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 RNA5SP217-201ENST00000515959 91 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 RNU6-528P-201ENST00000516926 100 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 DUXAP5-201ENST00000529668 529 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AC009094.1-201ENST00000564443 426 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 MIR5680-201ENST00000577577 84 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AC013444.2-201ENST00000603317 787 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AC007179.3-201ENST00000604976 235 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AL590099.1-201ENST00000615276 138 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AC095031.1-201ENST00000623685 672 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AC120349.3-201ENST00000624377 529 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AC004972.1-201ENST00000623934 2209 ntBASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.06□□□□□ -1.76
SMC4Q9NTJ3 AL079305.1-201ENST00000623159 3008 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC009812.4-201ENST00000569134 1805 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AL391994.1-201ENST00000254724 282 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 RNA5SP295-201ENST00000362655 121 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC092447.3-201ENST00000426027 686 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AL590103.1-201ENST00000434488 307 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC104978.1-201ENST00000449387 391 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 RPL23AP35-201ENST00000451906 501 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 ELOCP23-201ENST00000452014 332 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC109925.1-201ENST00000478069 331 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC092185.1-201ENST00000491371 97 ntBASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.05□□□□□ -1.76
SMC4Q9NTJ3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms