Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TREX1Q9NSU2 AL513185.3-201ENST00000433335 1300 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TREX1Q9NSU2 RNU5B-1-201ENST00000363286 116 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 RNU6-1066P-201ENST00000363573 105 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 SNORA80A-201ENST00000363922 136 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 SNORA25.6-201ENST00000364121 118 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 RNU6-207P-201ENST00000384137 107 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.54□□□□□ -2
TREX1Q9NSU2 SUMO1P4-201ENST00000429430 302 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 EZH2P1-201ENST00000431167 291 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.54□□□□□ -2
TREX1Q9NSU2 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.54□□□□□ -2
TREX1Q9NSU2 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.54□□□□□ -2
TREX1Q9NSU2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.54□□□□□ -2
TREX1Q9NSU2 OR6K5P-201ENST00000447050 945 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 COX6CP18-201ENST00000448769 222 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.54□□□□□ -2
TREX1Q9NSU2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.54□□□□□ -2
TREX1Q9NSU2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.54□□□□□ -2
TREX1Q9NSU2 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.54□□□□□ -2
TREX1Q9NSU2 AC008628.1-201ENST00000508663 265 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.54□□□□□ -2
TREX1Q9NSU2 TBCAP3-201ENST00000512475 312 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 RNU6-826P-201ENST00000516827 104 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.54□□□□□ -2
TREX1Q9NSU2 AC023632.1-201ENST00000518463 375 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.54□□□□□ -2
TREX1Q9NSU2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.54□□□□□ -2
TREX1Q9NSU2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.54□□□□□ -2
TREX1Q9NSU2 MED28P6-201ENST00000558776 231 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.54□□□□□ -2
TREX1Q9NSU2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.54□□□□□ -2
TREX1Q9NSU2 AP005137.2-201ENST00000609238 400 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 VN1R7P-201ENST00000619242 903 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.54□□□□□ -2
TREX1Q9NSU2 AC026634.1-201ENST00000634369 198 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 MFSD8-245ENST00000641743 948 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.54□□□□□ -2
TREX1Q9NSU2 AC087359.1-201ENST00000508335 1740 ntBASIC2.54□□□□□ -2
TREX1Q9NSU2 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.53□□□□□ -2
TREX1Q9NSU2 MTCO1P23-201ENST00000415223 1526 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 RNU6-468P-201ENST00000384003 109 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 MIR34A-201ENST00000385130 110 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 MCTS2P-201ENST00000394552 546 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AL355615.1-201ENST00000406187 641 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AC096533.1-201ENST00000411645 353 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 Z92545.1-201ENST00000411782 234 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 MTATP6P11-201ENST00000428071 670 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AC092393.1-201ENST00000439625 742 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AC025750.2-201ENST00000442609 450 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AP000705.1-201ENST00000454567 350 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.53□□□□□ -2
TREX1Q9NSU2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.53□□□□□ -2
TREX1Q9NSU2 RPS15AP34-201ENST00000487776 387 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 RPS27P27-201ENST00000498779 255 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AC026801.2-201ENST00000515352 425 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 snoZ278.1-201ENST00000517059 112 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.53□□□□□ -2
TREX1Q9NSU2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.53□□□□□ -2
TREX1Q9NSU2 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.53□□□□□ -2
TREX1Q9NSU2 MIR3609-201ENST00000582661 80 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 MIR3670-2-201ENST00000582974 65 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 MIR3670-1-201ENST00000584160 65 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.53□□□□□ -2
TREX1Q9NSU2 MIR3670-3-201ENST00000584855 65 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.53□□□□□ -2
TREX1Q9NSU2 AL022099.1-201ENST00000604551 712 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AC024560.3-201ENST00000608482 349 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 MIR3670-4-201ENST00000612260 65 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AL161629.2-201ENST00000615347 275 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.53□□□□□ -2
TREX1Q9NSU2 AL353748.2-201ENST00000622148 471 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 AC080188.3-201ENST00000624842 748 ntBASIC2.53□□□□□ -2
TREX1Q9NSU2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TREX1Q9NSU2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
TREX1Q9NSU2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2.01
TREX1Q9NSU2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.53□□□□□ -2.01
TREX1Q9NSU2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 HMGB1P5-201ENST00000255320 642 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC062016.1-201ENST00000355719 319 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 SNORD51-201ENST00000384320 80 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 MIR217-201ENST00000384817 110 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AL139039.1-201ENST00000401900 692 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.52□□□□□ -2.01
TREX1Q9NSU2 COTL1P1-201ENST00000422309 375 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC019097.1-201ENST00000424783 735 ntBASIC2.52□□□□□ -2.01
TREX1Q9NSU2 AC063976.3-201ENST00000426849 329 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms