Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MTCO2P17-201ENST00000424336 677 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RPEP3-201ENST00000425462 676 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC091390.3-201ENST00000426478 338 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 CNOT7P1-201ENST00000429006 852 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC018644.1-201ENST00000429934 551 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 HMGN2P31-201ENST00000432430 273 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RPS15AP5-201ENST00000436276 388 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 CEACAMP7-201ENST00000444105 496 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 CBWD4P-201ENST00000445695 655 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 VN1R10P-201ENST00000447106 875 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AL136380.1-201ENST00000447970 162 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RPL36AP55-201ENST00000454114 305 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RPL35AP28-201ENST00000459730 331 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 UQCRHP4-201ENST00000471686 272 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 BX284632.1-201ENST00000478218 541 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC013828.1-201ENST00000481845 158 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC068781.1-201ENST00000488231 618 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RPS29P20-201ENST00000489592 171 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 OR4G11P-201ENST00000492842 939 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RNU6-1102P-201ENST00000516149 96 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 SNORA31.6-201ENST00000516241 130 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 SNORA31.25-201ENST00000517242 134 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RNU2-19P-201ENST00000517288 84 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 PCNPP1-201ENST00000552501 511 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RN7SL703P-201ENST00000578485 302 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RPL12P25-202ENST00000598100 674 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC005229.3-201ENST00000603438 323 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 PRELID3BP8-201ENST00000604148 295 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC013244.1-201ENST00000604279 193 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AL162713.1-201ENST00000604480 262 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 YPEL5P2-201ENST00000605553 359 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC004067.1-201ENST00000608733 700 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC004908.2-201ENST00000609090 574 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC092954.1-201ENST00000609121 445 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 MIR6726-201ENST00000613751 61 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC112484.5-201ENST00000624189 228 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 MTCO1P11-201ENST00000429111 1528 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 ANKRD36P1-201ENST00000344424 659 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 SNORD9-201ENST00000362566 104 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 RNA5SP72-201ENST00000364442 117 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 RNU6-741P-201ENST00000383889 107 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 MIR129-1-201ENST00000384972 72 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 SNORD67-201ENST00000390833 111 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 U8.14-201ENST00000390843 143 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 RPS4XP8-201ENST00000402039 771 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 TMSB4XP8-201ENST00000402089 135 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL450338.1-201ENST00000407987 512 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 RNU2-49P-201ENST00000410666 184 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 SNORD56-201ENST00000413522 71 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 TMSB4XP6-201ENST00000415187 135 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC027644.1-201ENST00000419595 298 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 MTCO3P1-205ENST00000422088 832 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC019178.2-201ENST00000423595 505 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 TMSB4XP1-201ENST00000424567 135 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 HMGB1P9-201ENST00000429856 646 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC011242.1-201ENST00000433596 1158 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC098826.1-201ENST00000433943 471 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL512661.1-201ENST00000434586 1253 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC005297.2-201ENST00000450430 606 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms