Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ZNF734P-201ENST00000419494 1534 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 NUP58P1-201ENST00000502546 1738 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 RNU6-769P-201ENST00000384407 104 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 RNU6-878P-201ENST00000384578 110 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 DEFB108C-201ENST00000400154 252 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AL583834.1-201ENST00000406943 343 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 CDK8P2-201ENST00000415020 547 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 RPL32P35-201ENST00000415214 394 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 RPL31P45-201ENST00000419532 356 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 OFD1P18Y-201ENST00000420889 959 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AL445669.1-201ENST00000426743 755 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 OR2AS1P-201ENST00000427827 319 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC005326.1-201ENST00000429197 123 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 GDI2P2-201ENST00000445131 608 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AL162388.1-201ENST00000450912 352 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 OR6K1P-201ENST00000456766 971 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 MTCO3P44-201ENST00000510977 541 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC034159.1-201ENST00000513885 583 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 IGKV2D-36-201ENST00000518643 226 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC053481.3-201ENST00000577881 843 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 MIR4307-201ENST00000582802 84 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AL009028.1-201ENST00000604895 802 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AL390208.1-201ENST00000605885 644 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 AC027807.2-201ENST00000616099 408 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 OR11H5P-202ENST00000641612 1325 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 PABPC1P7-201ENST00000413177 1513 ntBASIC3.39□□□□□ -1.87
SIX2Q9NPC8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 SNORA75-201ENST00000384158 137 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 Y_RNA.505-201ENST00000384489 102 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 SNORA70E-201ENST00000384492 135 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 HSPD1P16-201ENST00000402302 394 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 MTND4LP20-201ENST00000402379 270 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AL663109.1-201ENST00000411498 844 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 MTCO3P41-201ENST00000414801 328 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 MTATP6P27-201ENST00000416987 621 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC007742.1-201ENST00000425789 329 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 PSMA6P3-201ENST00000428242 164 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 PSMA2P3-201ENST00000429685 675 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AL590233.1-201ENST00000430017 456 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC109583.1-201ENST00000432156 268 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 ELOCP26-201ENST00000436067 329 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 RPS24P1-201ENST00000438550 371 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC108734.1-201ENST00000439549 399 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 SSXP1-201ENST00000453640 473 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AP002812.1-201ENST00000495378 474 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 FABP5P5-201ENST00000515537 406 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC245166.1-201ENST00000521012 253 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC011611.1-201ENST00000552179 197 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC037471.2-201ENST00000564941 598 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC105429.2-201ENST00000610567 517 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC104073.3-201ENST00000610942 955 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC013562.2-201ENST00000611632 603 ntBASIC3.38□□□□□ -1.87
SIX2Q9NPC8 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SIX2Q9NPC8 AC004825.2-201ENST00000616634 455 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms