Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-99P-201ENST00000364721 107 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSU72Q9NP77 Y_RNA.428-201ENST00000384078 102 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 RNU6-842P-201ENST00000384269 107 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 RNU4-65P-201ENST00000410473 140 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 MRPS18CP6-201ENST00000423587 223 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 USMG5P1-201ENST00000425964 177 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 MRPS18BP2-201ENST00000434310 759 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 AC092451.1-201ENST00000480211 153 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSU72Q9NP77 RN7SL591P-201ENST00000496150 292 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 AC010350.1-201ENST00000504908 231 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSU72Q9NP77 MTCO1P24-201ENST00000515438 1558 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 AP006587.4-201ENST00000526053 529 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 AL161423.1-201ENST00000613700 262 ntBASIC4.93□□□□□ -1.62
SSU72Q9NP77 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SSU72Q9NP77 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSU72Q9NP77 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSU72Q9NP77 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSU72Q9NP77 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSU72Q9NP77 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSU72Q9NP77 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSU72Q9NP77 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSU72Q9NP77 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSU72Q9NP77 RNU6-266P-201ENST00000364225 107 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 RHOT1P2-201ENST00000366423 333 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 Y_RNA.396-201ENST00000383949 103 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 RNU6-14P-201ENST00000384630 106 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 MIR600-201ENST00000385007 98 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AL139039.1-201ENST00000401900 692 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AL603908.1-201ENST00000406098 201 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC092809.3-201ENST00000415453 231 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSU72Q9NP77 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 RPS24P13-201ENST00000442520 397 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 TDGF1P1-201ENST00000445734 527 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 FABP5P13-201ENST00000452144 328 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 PCNPP5-201ENST00000452246 481 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 RN7SL817P-201ENST00000480777 288 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 RN7SL558P-201ENST00000497468 299 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC009901.1-201ENST00000506703 541 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 SLC25A15P5-201ENST00000508033 253 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC090022.1-201ENST00000546569 311 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 AL138895.2-201ENST00000603019 178 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 FO393422.1-201ENST00000603908 708 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AL158032.1-201ENST00000605401 106 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC091979.2-201ENST00000607514 214 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AL096712.1-201ENST00000614561 159 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 uc_338.18-201ENST00000615451 175 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC007998.5-201ENST00000622938 237 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC073593.1-201ENST00000624500 411 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSU72Q9NP77 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSU72Q9NP77 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSU72Q9NP77 AC108751.5-201ENST00000492880 1336 ntBASIC4.92□□□□□ -1.62
SSU72Q9NP77 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
SSU72Q9NP77 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 RN7SKP104-201ENST00000362605 328 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 RN7SKP124-201ENST00000364730 341 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 SNORA23-201ENST00000365128 182 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 Y_RNA.493-201ENST00000384422 102 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms