Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 AC090132.2-201ENST00000615881 347 ntBASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 AL512427.1-201ENST00000618593 349 ntBASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 AL596245.1-201ENST00000618994 362 ntBASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 AC068880.5-201ENST00000624331 290 ntBASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 MIR3651-201ENST00000630427 90 ntBASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 OR5H6-203ENST00000642105 978 ntBASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 AP005901.5-201ENST00000545779 1796 ntBASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 AL356473.1-201ENST00000406203 1408 ntBASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 AC138915.1-201ENST00000565427 1685 ntBASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LRRC40Q9H9A6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.9□□□□□ -1.94
LRRC40Q9H9A6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 MIR181A2-201ENST00000384863 110 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 MIR181B1-201ENST00000385240 110 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 Y_RNA.578-201ENST00000390903 88 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 MTCO1P56-201ENST00000401674 224 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AL161449.1-201ENST00000414531 1199 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AL513477.1-202ENST00000417061 214 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AL590383.1-201ENST00000428602 75 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 NIPA2P5-201ENST00000452282 464 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AC114981.1-201ENST00000503897 678 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 SCGB1D5P-201ENST00000515134 247 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 RNA5SP76-201ENST00000516277 87 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AC092451.2-201ENST00000538746 658 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 MIR3912-201ENST00000577566 105 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AP001429.1-201ENST00000602568 530 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AC096577.2-201ENST00000611455 153 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AC010680.1-201ENST00000590024 3590 ntBASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LRRC40Q9H9A6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 RNU6-28P-201ENST00000362378 107 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 RNU6-270P-201ENST00000364131 105 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 SNORD46.1-201ENST00000364139 104 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 MIR325-201ENST00000385260 98 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 RNA5SP354-201ENST00000391247 136 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 RPL21P75-201ENST00000396599 483 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 RPL21P28-201ENST00000401418 483 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 FO393413.1-201ENST00000402892 195 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AL592114.1-201ENST00000403842 483 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AL024507.1-201ENST00000412741 274 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 MTCO2P5-201ENST00000422621 426 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 TAAR7P-201ENST00000436141 242 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AL671855.1-201ENST00000446875 1203 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 RPL21P39-201ENST00000463605 483 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC011979.1-201ENST00000472300 483 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 RPL21P93-201ENST00000480465 489 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC233702.1-201ENST00000482905 502 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC087190.1-201ENST00000484462 480 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AL049874.1-201ENST00000489560 388 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC093591.1-201ENST00000491435 481 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 RPL21P16-201ENST00000495531 483 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 MTCYBP16-201ENST00000509187 1129 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 RNU6-1028P-201ENST00000517164 93 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 SNORA31.22-201ENST00000517204 135 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 MTCO1P47-201ENST00000523889 1271 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 HPRT1P3-201ENST00000539521 576 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC090888.1-201ENST00000561335 1141 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 HMGB1P6-201ENST00000569046 646 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC090615.1-201ENST00000577519 154 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AL022067.1-201ENST00000602426 454 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC069545.1-201ENST00000605671 358 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AL392048.1-201ENST00000613946 534 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AL590099.1-201ENST00000615276 138 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AL355493.4-201ENST00000618530 292 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AC008443.7-201ENST00000622195 246 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 MIR6733-201ENST00000635723 61 ntBASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.89□□□□□ -1.95
LRRC40Q9H9A6 MTCO1P9-201ENST00000505577 1534 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms