Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
NXF3Q9H4D5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 RNA5SP258-201ENST00000362750 119 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 snoZ40.1-201ENST00000364540 72 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 SNORD65.1-201ENST00000390889 71 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AL139039.1-201ENST00000401900 692 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 RN7SKP123-201ENST00000410732 291 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 RNU4-22P-201ENST00000411058 166 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 RPS3AP37-201ENST00000419176 745 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC092648.1-201ENST00000425870 423 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 DPRXP1-201ENST00000426312 460 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 NANOGP2-201ENST00000435391 727 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AL445669.2-201ENST00000454425 421 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC010301.1-201ENST00000473936 355 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC108729.1-201ENST00000487812 947 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC114781.4-201ENST00000513707 639 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 SNORA31.26-201ENST00000517250 137 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC234778.2-201ENST00000566241 354 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 MTND3P13-201ENST00000574391 343 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC024257.5-201ENST00000612739 531 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AL158163.2-201ENST00000619110 700 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC005858.4-201ENST00000623191 700 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AL512506.2-201ENST00000624472 458 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 MTND2P41-201ENST00000637599 773 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 AL049780.3-201ENST00000624612 1583 ntBASIC2.9□□□□□ -1.95
NXF3Q9H4D5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NXF3Q9H4D5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 RNU6-251P-201ENST00000363235 104 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 RNU6-1066P-201ENST00000363573 105 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 RNU6-263P-201ENST00000363811 107 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 MTND4LP20-201ENST00000402379 270 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 FCF1P2-201ENST00000415284 583 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC007435.1-201ENST00000421086 415 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AL513175.2-201ENST00000422071 443 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 MTND2P5-201ENST00000432656 1006 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 SNRPEP4-201ENST00000435815 279 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC241584.1-201ENST00000438469 1241 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 RPS3P1-201ENST00000456781 192 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 MTCO3P2-201ENST00000457365 171 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 snoU13.4-201ENST00000458916 104 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 RPS26P21-201ENST00000475397 348 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 BOLA3P3-201ENST00000505182 232 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC010460.2-201ENST00000509054 677 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AP000790.1-201ENST00000528891 737 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC093519.1-201ENST00000566109 298 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC069545.1-201ENST00000605671 358 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC092608.2-201ENST00000624427 218 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC026634.1-201ENST00000634369 198 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC090897.3-201ENST00000636973 1157 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 AC244517.1-201ENST00000606030 2086 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 ASNSP3-201ENST00000451989 1306 ntBASIC2.89□□□□□ -1.95
NXF3Q9H4D5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AL672167.1-206ENST00000356293 943 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 RNU4-82P-201ENST00000362443 140 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 SUGT1P1-201ENST00000379514 476 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 RNU6-1300P-201ENST00000391046 108 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AL133264.1-201ENST00000407157 562 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 RNU4-78P-201ENST00000410940 126 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AL356320.2-201ENST00000417263 507 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 YPEL5P1-201ENST00000419731 367 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC099677.1-201ENST00000420575 175 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 FNDC3CP-201ENST00000420795 1155 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms