Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 AC121333.1-201ENST00000567488 2709 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.56□□□□□ -1.52
TRAIPQ9BWF2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 Y_RNA.399-201ENST00000383955 105 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 RNU6-45P-201ENST00000384471 107 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 MIR708-201ENST00000390708 88 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 RNU6-1197P-201ENST00000391183 107 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 RNU2-33P-201ENST00000410344 192 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 AL591848.1-201ENST00000413092 322 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 NDUFB4P5-201ENST00000415445 361 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 Z85995.1-201ENST00000415547 335 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 AL353678.1-201ENST00000422735 741 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 TAAR7P-201ENST00000436141 242 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 NDUFA5P4-201ENST00000436704 385 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 RPS23P3-201ENST00000470993 430 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 RNA5SP497-201ENST00000516081 97 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 Y_RNA.675-201ENST00000516389 149 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 MYL12AP1-201ENST00000518490 515 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 HSPE1P5-201ENST00000561489 272 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 AC005858.4-201ENST00000623191 700 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 TPTEP1-208ENST00000636884 213 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 ZNF285B-201ENST00000561698 1767 ntBASIC5.55□□□□□ -1.52
TRAIPQ9BWF2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 Y_RNA.534-201ENST00000384599 112 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 SNORA66-201ENST00000384792 133 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AL356432.1-201ENST00000405809 419 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 RPS4XP7-201ENST00000406274 780 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 BX323014.1-201ENST00000412876 237 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 RPL21P90-201ENST00000415692 466 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 PDCL2P1-201ENST00000419302 352 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 MTND4P28-201ENST00000426217 387 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 RNU6-329P-201ENST00000459618 107 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 KC877373.1-201ENST00000479066 408 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AC104164.2-201ENST00000496953 495 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 MTCO3P9-201ENST00000506989 781 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AC111000.3-201ENST00000508057 576 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 SNORA19.2-201ENST00000516013 114 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 RNU6-1315P-201ENST00000517187 99 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 MIR6820-201ENST00000611508 62 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AC103705.1-201ENST00000619013 241 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AC022418.1-201ENST00000624118 445 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AL359697.1-201ENST00000624879 587 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 MTND1P37-201ENST00000636562 264 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 HSPA8P4-201ENST00000511877 1920 ntBASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAIPQ9BWF2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 A2MP1-204ENST00000566278 4130 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AC012618.3-205ENST00000637896 1496 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AC007785.2-201ENST00000598627 1916 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms