Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 HMGN2P26-201ENST00000463169 339 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 HMGB1P25-201ENST00000468402 607 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC007537.2-201ENST00000472093 511 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 RN7SL817P-201ENST00000480777 288 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC108022.1-201ENST00000493466 478 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC068305.1-201ENST00000497406 726 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC105417.1-201ENST00000514691 285 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 RNU4-49P-201ENST00000516080 140 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 SUMO2P20-201ENST00000520803 283 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 CR383656.7-201ENST00000548164 174 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AL133153.1-201ENST00000557756 303 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC005668.1-201ENST00000571142 476 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC023575.1-201ENST00000580510 358 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 MIR4742-201ENST00000581069 85 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC020910.2-201ENST00000603635 610 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC010591.1-201ENST00000603941 649 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC021646.1-201ENST00000605469 484 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AL133255.1-201ENST00000606374 441 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC079684.1-201ENST00000621405 437 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 AP000843.1-201ENST00000624880 701 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 OR52H1-202ENST00000641796 1061 ntBASIC4.26□□□□□ -1.73
NDC1Q9BTX1 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.26□□□□□ -1.73
NDC1Q9BTX1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 MAPK10-304ENST00000641341 3984 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 RNU1-20P-201ENST00000363314 162 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 Y_RNA.184-201ENST00000363884 108 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 SNORD37.1-201ENST00000390968 65 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 HDGFP1-201ENST00000405943 252 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 NDUFB4P5-201ENST00000415445 361 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 HMGB3P9-201ENST00000441799 583 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 PHBP16-201ENST00000446318 950 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AL590399.6-201ENST00000446396 307 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 RPL29P29-201ENST00000448725 423 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 MRPS17P3-201ENST00000465453 385 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AC109327.1-201ENST00000471666 403 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 MTCO1P24-201ENST00000515438 1558 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 RNU2-10P-201ENST00000516375 211 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 HMGN1P28-201ENST00000521340 364 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AC103843.2-201ENST00000530523 682 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 BNIP3P6-201ENST00000549284 499 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 U73479.1-201ENST00000618062 168 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 AC139769.1-204ENST00000472297 1931 ntBASIC4.25□□□□□ -1.73
NDC1Q9BTX1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NDC1Q9BTX1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 MAPK10-349ENST00000641767 3661 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 FAM91A3P-201ENST00000456826 2544 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDC1Q9BTX1 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 OR5P1P-201ENST00000299512 925 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 Y_RNA.138-201ENST00000363462 102 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 Y_RNA.231-201ENST00000364358 102 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 Y_RNA.431-201ENST00000384086 102 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 RNU6-432P-201ENST00000384196 109 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 MIR558-201ENST00000384920 94 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 MIR454-201ENST00000390180 115 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 Y_RNA.615-201ENST00000410769 117 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 RN7SKP140-201ENST00000411196 284 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AC011933.1-201ENST00000413334 321 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 RPL17P36-201ENST00000420302 549 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 AL645937.1-202ENST00000421799 937 ntBASIC4.24□□□□□ -1.73
NDC1Q9BTX1 PDSS1P1-201ENST00000422953 1114 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms