Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 Z92545.1-201ENST00000411782 234 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 HMGB3P2-201ENST00000411913 584 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AL592148.1-201ENST00000413568 445 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 RPL7P44-201ENST00000424827 742 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AL358075.3-201ENST00000426289 226 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 MTATP6P11-201ENST00000428071 670 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 MYL8P-204ENST00000431574 518 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 BX248409.1-201ENST00000455497 255 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC087588.1-201ENST00000462203 316 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 NDUFB4P2-201ENST00000509515 391 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 TTC39CP1-201ENST00000512513 755 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC004217.3-201ENST00000551552 878 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 ANP32BP3-201ENST00000559213 706 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 CYCSP39-201ENST00000565821 309 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC022069.1-201ENST00000582910 658 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC007621.1-201ENST00000604544 437 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC002487.1-201ENST00000604565 994 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AL160281.1-201ENST00000605307 311 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC005000.2-201ENST00000605468 310 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC012443.1-201ENST00000605605 231 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AP005137.2-201ENST00000609238 400 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC004852.3-201ENST00000614131 326 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC079395.3-201ENST00000615161 484 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC006386.2-201ENST00000624491 75 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 AC012005.1-201ENST00000624575 75 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.43□□□□□ -2.18
LIMD2Q9BT23 ZNF663P-202ENST00000641770 1131 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 TPTE2P4-201ENST00000258589 1605 ntBASIC1.43□□□□□ -2.18
LIMD2Q9BT23 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 ZNF720P1-201ENST00000562403 1939 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC008568.2-201ENST00000623862 2313 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 OR5J1P-201ENST00000313544 939 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 FAM133CP-201ENST00000332869 704 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 MIR208A-201ENST00000362287 71 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 SNORA5B-201ENST00000363786 132 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 RNU6-1197P-201ENST00000391183 107 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AL445529.1-201ENST00000398713 389 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 NPM1P11-201ENST00000417106 855 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 ARL2BPP3-201ENST00000421226 480 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC090774.1-201ENST00000435925 246 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 UBE2FP3-201ENST00000436366 524 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 PNPLA4P1-201ENST00000458328 305 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 RNU7-23P-201ENST00000459465 62 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 LINC00888-204ENST00000487386 421 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 RPL30P5-201ENST00000494923 336 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 KLRA1P-201ENST00000503499 986 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 COL6A4P2-205ENST00000509855 506 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC008413.1-201ENST00000511864 177 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 RNA5SP364-201ENST00000516938 78 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 EEF1B2P4-201ENST00000551398 348 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC006023.1-201ENST00000603944 259 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC005332.10-201ENST00000612725 619 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 UCA1.1-201ENST00000620952 75 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AP003485.2-201ENST00000623636 610 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AP003400.6-201ENST00000624698 740 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
LIMD2Q9BT23 KPNA2P1-201ENST00000458289 1591 ntBASIC1.42□□□□□ -2.18
LIMD2Q9BT23 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LIMD2Q9BT23 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
LIMD2Q9BT23 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LIMD2Q9BT23 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
LIMD2Q9BT23 RNU6-1339P-201ENST00000363574 91 ntBASIC1.41□□□□□ -2.18
LIMD2Q9BT23 RNU6-270P-201ENST00000364131 105 ntBASIC1.41□□□□□ -2.18
LIMD2Q9BT23 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.41□□□□□ -2.18
LIMD2Q9BT23 RNU6-921P-201ENST00000384361 107 ntBASIC1.41□□□□□ -2.18
LIMD2Q9BT23 MIR17-201ENST00000385012 84 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms