Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MTATP6P4-201ENST00000427725 675 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 RPS15AP7-201ENST00000439294 405 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USB1Q9BQ65 SDAD1P2-201ENST00000441308 2028 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 RPL5P7-201ENST00000444235 813 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 SNORD2.1-201ENST00000458762 69 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 snoU13.29-201ENST00000459370 104 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 AP002453.1-201ENST00000492327 668 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 SNORA58-201ENST00000505219 137 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USB1Q9BQ65 AC074255.1-201ENST00000511259 501 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 AC006427.1-201ENST00000514359 712 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 RNU6-377P-201ENST00000515965 102 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USB1Q9BQ65 AC005224.3-201ENST00000584683 2140 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 LINC01109-201ENST00000603837 3081 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 AL161798.1-201ENST00000604630 131 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 AC111152.1-202ENST00000635848 339 ntBASIC5.61□□□□□ -1.51
USB1Q9BQ65 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USB1Q9BQ65 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
USB1Q9BQ65 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
USB1Q9BQ65 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AL731556.1-201ENST00000394628 3711 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC133552.1-201ENST00000569988 4007 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 RNA5SP232-201ENST00000364144 119 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 RNA5SP77-201ENST00000365394 120 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 RNA5SP279-201ENST00000365513 117 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 LAP3P1-201ENST00000403648 294 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 RN7SKP281-201ENST00000410472 352 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AL662874.1-201ENST00000426065 230 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AL627311.1-201ENST00000431514 115 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC009963.3-201ENST00000458090 486 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 snoU13.3-201ENST00000459441 104 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC073901.1-201ENST00000462471 408 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 RPS4XP1-201ENST00000482189 787 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 RPL21P13-201ENST00000488305 481 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AL160314.1-201ENST00000490836 438 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 GM2AP2-201ENST00000491764 562 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC018797.1-201ENST00000510791 255 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 RNA5SP473-201ENST00000516402 125 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC008694.2-201ENST00000517591 306 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC022790.1-201ENST00000522872 204 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 TOMM20P1-201ENST00000534518 427 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 TPRX1P1-201ENST00000557620 319 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 MIR4423-201ENST00000580922 80 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC010928.2-201ENST00000588017 287 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC002545.1-201ENST00000592511 181 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC234771.5-201ENST00000600161 514 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC091193.1-201ENST00000604640 448 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.6□□□□□ -1.51
USB1Q9BQ65 DOCK11P1-201ENST00000553480 5932 ntBASIC5.6□□□□□ -1.51
USB1Q9BQ65 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USB1Q9BQ65 AC233981.2-201ENST00000611524 1614 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
USB1Q9BQ65 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USB1Q9BQ65 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USB1Q9BQ65 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USB1Q9BQ65 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USB1Q9BQ65 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USB1Q9BQ65 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.59□□□□□ -1.51
USB1Q9BQ65 MIR410-201ENST00000362222 80 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 RNU6-449P-201ENST00000383914 107 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 Y_RNA.400-201ENST00000383963 111 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 RNU6-146P-201ENST00000384602 108 ntBASIC5.59□□□□□ -1.51
USB1Q9BQ65 RNU6-658P-201ENST00000384606 106 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms