Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MIR4452-201ENST00000583004 71 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 AC113368.1-201ENST00000603736 382 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 AL049779.4-201ENST00000604500 156 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 MIR502-201ENST00000606349 86 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ABCA3Q99758 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.31□□□□□ -2.04
ABCA3Q99758 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.31□□□□□ -2.04
ABCA3Q99758 MTND5P35-201ENST00000557537 1720 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
ABCA3Q99758 AC002546.1-201ENST00000588041 2504 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
ABCA3Q99758 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ABCA3Q99758 AC233981.2-201ENST00000611524 1614 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 RNU4-74P-201ENST00000411280 161 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 AC093084.1-201ENST00000424233 687 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.31□□□□□ -2.04
ABCA3Q99758 PIGFP3-201ENST00000441918 722 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 USP9YP15-201ENST00000442391 422 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 AMD1P1-201ENST00000457220 922 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 AC073901.1-201ENST00000462471 408 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 AC146507.1-201ENST00000468335 354 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.31□□□□□ -2.04
ABCA3Q99758 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.31□□□□□ -2.04
ABCA3Q99758 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.31□□□□□ -2.04
ABCA3Q99758 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.31□□□□□ -2.04
ABCA3Q99758 NOP56P3-201ENST00000549457 385 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.31□□□□□ -2.04
ABCA3Q99758 AC092954.1-201ENST00000609121 445 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 AC011890.2-201ENST00000613393 294 ntBASIC2.31□□□□□ -2.04
ABCA3Q99758 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
ABCA3Q99758 ZNF33CP-201ENST00000432492 2030 ntBASIC2.3□□□□□ -2.04
ABCA3Q99758 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ABCA3Q99758 HMGB1P27-201ENST00000431429 603 ntBASIC2.3□□□□□ -2.04
ABCA3Q99758 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCA3Q99758 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCA3Q99758 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCA3Q99758 AC108734.3-201ENST00000481241 1165 ntBASIC2.3□□□□□ -2.04
ABCA3Q99758 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCA3Q99758 SYF2P1-201ENST00000550658 413 ntBASIC2.3□□□□□ -2.04
ABCA3Q99758 AC098848.2-201ENST00000588023 330 ntBASIC2.3□□□□□ -2.04
ABCA3Q99758 AC006023.2-201ENST00000609916 167 ntBASIC2.3□□□□□ -2.04
ABCA3Q99758 RNA5SP27-201ENST00000363839 119 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ABCA3Q99758 AL035405.1-201ENST00000400795 710 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 RNU2-71P-201ENST00000411395 189 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 POLHP1-201ENST00000411806 470 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 FNDC3CP-201ENST00000420795 1155 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 AL358075.3-201ENST00000426289 226 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.29□□□□□ -2.04
ABCA3Q99758 HIGD1AP11-201ENST00000438361 280 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 AL021397.1-201ENST00000451806 248 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 DUXAP3-201ENST00000603616 594 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 AC019159.1-201ENST00000605094 187 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 RMST_6.1-201ENST00000611980 203 ntBASIC2.29□□□□□ -2.04
ABCA3Q99758 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.29□□□□□ -2.04
ABCA3Q99758 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
ABCA3Q99758 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ABCA3Q99758 AL391987.6-201ENST00000305671 199 ntBASIC2.28□□□□□ -2.04
ABCA3Q99758 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.28□□□□□ -2.04
ABCA3Q99758 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.28□□□□□ -2.04
ABCA3Q99758 AC145207.9-201ENST00000623802 325 ntBASIC2.28□□□□□ -2.04
ABCA3Q99758 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
ABCA3Q99758 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
ABCA3Q99758 AC121333.1-201ENST00000567488 2709 ntBASIC2.28□□□□□ -2.04
ABCA3Q99758 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
ABCA3Q99758 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ABCA3Q99758 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.28□□□□□ -2.05
ABCA3Q99758 AC109780.2-201ENST00000413467 845 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.28□□□□□ -2.05
ABCA3Q99758 HSPE1P1-201ENST00000421494 318 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 SUMO1P4-201ENST00000429430 302 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 RPL17P49-201ENST00000443728 411 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 AL353898.1-201ENST00000444055 238 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 RPL21P39-201ENST00000463605 483 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.28□□□□□ -2.05
ABCA3Q99758 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.28□□□□□ -2.05
ABCA3Q99758 MTCO2P32-201ENST00000514865 403 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 MIR4421-201ENST00000578133 69 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 AP001180.3-201ENST00000582221 145 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.28□□□□□ -2.05
ABCA3Q99758 YWHAQP7-201ENST00000603536 658 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 KATNBL1P1-201ENST00000605192 748 ntBASIC2.28□□□□□ -2.05
ABCA3Q99758 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.27□□□□□ -2.05
ABCA3Q99758 AC110792.3-201ENST00000595906 1614 ntBASIC2.27□□□□□ -2.05
ABCA3Q99758 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ABCA3Q99758 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.27□□□□□ -2.05
ABCA3Q99758 AL645568.3-201ENST00000433683 316 ntBASIC2.27□□□□□ -2.05
ABCA3Q99758 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ABCA3Q99758 PPP1R2P5-201ENST00000457256 603 ntBASIC2.27□□□□□ -2.05
ABCA3Q99758 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.27□□□□□ -2.05
ABCA3Q99758 AC034102.8-201ENST00000615146 484 ntBASIC2.27□□□□□ -2.05
ABCA3Q99758 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ABCA3Q99758 AL121972.1-201ENST00000402023 252 ntBASIC2.26□□□□□ -2.05
ABCA3Q99758 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.26□□□□□ -2.05
ABCA3Q99758 RPL21P104-201ENST00000464143 478 ntBASIC2.26□□□□□ -2.05
ABCA3Q99758 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ABCA3Q99758 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.26□□□□□ -2.05
ABCA3Q99758 PRELID2P1-201ENST00000552837 301 ntBASIC2.26□□□□□ -2.05
ABCA3Q99758 DNAJC8P1-201ENST00000554535 372 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms