Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC090312.2-201ENST00000582687 378 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AP001029.3-201ENST00000588063 596 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AL109918.3-201ENST00000603072 338 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 APOOP1-201ENST00000604695 592 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 AC010201.1-201ENST00000605051 540 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 CTHRC1P1-201ENST00000605383 469 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 uc_338.22-201ENST00000622722 187 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR6830-201ENST00000636015 70 ntBASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP1Q96SZ6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC026951.1-201ENST00000559530 2459 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AL133243.3-201ENST00000617415 3004 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC046144.1-201ENST00000478559 1853 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC073343.1-201ENST00000328239 651 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 Y_RNA.452-201ENST00000384202 108 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 RPL23AP26-201ENST00000412728 464 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC009237.10-201ENST00000414112 510 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 MTCYBP9-201ENST00000431021 303 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AL160004.2-201ENST00000432935 350 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 Z98949.2-201ENST00000440996 144 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 FAM103A2P-201ENST00000444122 354 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC239809.1-201ENST00000450470 217 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 MTND3P16-201ENST00000452205 344 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 HMGB3P21-201ENST00000452483 547 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 SUMO1P2-201ENST00000452524 304 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC005008.1-201ENST00000456151 612 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 RPS15AP1-201ENST00000457423 391 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU7-63P-201ENST00000459054 62 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC078785.3-201ENST00000476607 425 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 RN7SL283P-201ENST00000489055 303 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC026782.1-201ENST00000512952 449 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AL389895.1-201ENST00000554127 252 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AL117187.1-201ENST00000555482 181 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC022884.3-201ENST00000579571 248 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR4512-201ENST00000583257 77 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AC007938.3-201ENST00000604965 623 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 BX664608.1-201ENST00000610519 487 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AL023881.1-201ENST00000621088 301 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR3653-201ENST00000625572 110 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 AP001350.1-201ENST00000601906 1524 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 KPNA2P2-201ENST00000419546 1489 ntBASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP1Q96SZ6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 OR1S2-201ENST00000302592 978 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 RNA5SP22-201ENST00000365393 109 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 Y_RNA.395-201ENST00000383945 109 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR92A2-201ENST00000385299 75 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 MTCYBP4-201ENST00000401524 249 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU2-47P-201ENST00000410649 186 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AL160275.2-201ENST00000412010 394 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 RPL36AP36-201ENST00000418616 301 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AL139095.3-201ENST00000419672 1203 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 HSPE1P1-201ENST00000421494 318 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC005517.2-201ENST00000424673 553 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 CEACAMP1-201ENST00000434624 1035 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU7-27P-201ENST00000459281 62 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC006512.1-201ENST00000468816 291 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC010618.1-201ENST00000469924 477 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 RPS15AP17-201ENST00000470598 390 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AL135752.1-201ENST00000479477 471 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC012181.1-201ENST00000479895 423 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC091167.1-201ENST00000492017 396 ntBASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP1Q96SZ6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms