Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 RNU6-500P-201ENST00000362349 107 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 RNU6-253P-201ENST00000384730 105 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AL024474.1-201ENST00000404655 591 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 MIR1302-8-201ENST00000408342 128 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC096664.2-201ENST00000411843 406 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AL451074.5-201ENST00000415894 435 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AL035407.1-201ENST00000429211 571 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 MTND1P20-201ENST00000430341 950 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 UBE2D3P4-201ENST00000441973 436 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 RPL23AP35-201ENST00000451906 501 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 RPS27AP8-201ENST00000452665 445 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC097493.1-201ENST00000463958 372 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC003982.1-202ENST00000469928 248 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 SYPL1P1-201ENST00000473622 768 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC096576.1-201ENST00000489014 359 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 TMEM251P1-201ENST00000503717 318 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC083906.5-201ENST00000503722 328 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 DSTNP2-201ENST00000504533 515 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 SCARNA13-201ENST00000516672 275 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 RNU6-678P-201ENST00000516832 109 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 HSPE1P3-201ENST00000559254 309 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 MIR5047-201ENST00000579212 100 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AL596327.1-201ENST00000603629 213 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AP003117.2-201ENST00000606010 545 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC080013.6-201ENST00000606185 215 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AC231657.1-201ENST00000624313 397 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AP003399.1-201ENST00000637534 361 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AP002907.1-201ENST00000606361 1430 ntBASIC4.1□□□□□ -1.75
SIN3AQ96ST3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
SIN3AQ96ST3 AL079343.1-201ENST00000572358 1771 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIN3AQ96ST3 RNU6-433P-201ENST00000363216 104 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 SNORD116-1-201ENST00000384335 95 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 RN7SKP58-201ENST00000411010 305 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AC107083.1-201ENST00000439643 279 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 EEF1E1P1-201ENST00000446998 430 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 ARPC3P2-201ENST00000457786 533 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AC026410.2-201ENST00000460281 156 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 PABPC1P3-201ENST00000469174 459 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.09□□□□□ -1.75
SIN3AQ96ST3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIN3AQ96ST3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.09□□□□□ -1.75
SIN3AQ96ST3 RN7SKP234-201ENST00000517173 224 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.09□□□□□ -1.75
SIN3AQ96ST3 MIR3915-201ENST00000578518 97 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AP005136.1-201ENST00000579765 429 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 PIGPP4-201ENST00000584447 307 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AC083899.3-201ENST00000603413 594 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AL358072.1-201ENST00000604156 575 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AC005046.1-201ENST00000608515 625 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AC090115.4-201ENST00000609970 188 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AF246928.1-201ENST00000623768 87 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AC079228.1-201ENST00000624774 1049 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 PCMTD1P7-201ENST00000634506 357 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 AL445523.1-201ENST00000451184 1362 ntBASIC4.09□□□□□ -1.75
SIN3AQ96ST3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIN3AQ96ST3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SIN3AQ96ST3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SIN3AQ96ST3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
SIN3AQ96ST3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.09□□□□□ -1.76
SIN3AQ96ST3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
SIN3AQ96ST3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIN3AQ96ST3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SIN3AQ96ST3 RPL21P132-201ENST00000331267 462 ntBASIC4.08□□□□□ -1.76
SIN3AQ96ST3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SIN3AQ96ST3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.08□□□□□ -1.76
SIN3AQ96ST3 Y_RNA.560-201ENST00000384689 102 ntBASIC4.08□□□□□ -1.76
SIN3AQ96ST3 MIR512-1-201ENST00000384913 84 ntBASIC4.08□□□□□ -1.76
SIN3AQ96ST3 DHFRP6-201ENST00000401776 268 ntBASIC4.08□□□□□ -1.76
SIN3AQ96ST3 AL121972.1-201ENST00000402023 252 ntBASIC4.08□□□□□ -1.76
SIN3AQ96ST3 HMGB1P17-201ENST00000403495 628 ntBASIC4.08□□□□□ -1.76
SIN3AQ96ST3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.08□□□□□ -1.76
SIN3AQ96ST3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.08□□□□□ -1.76
SIN3AQ96ST3 AC019178.2-201ENST00000423595 505 ntBASIC4.08□□□□□ -1.76
SIN3AQ96ST3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.08□□□□□ -1.76
SIN3AQ96ST3 AL035410.1-201ENST00000427409 427 ntBASIC4.08□□□□□ -1.76
SIN3AQ96ST3 MTND4P6-201ENST00000438297 472 ntBASIC4.08□□□□□ -1.76
SIN3AQ96ST3 MTND2P4-201ENST00000445034 1004 ntBASIC4.08□□□□□ -1.76
SIN3AQ96ST3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.08□□□□□ -1.76
SIN3AQ96ST3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.08□□□□□ -1.76
SIN3AQ96ST3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.08□□□□□ -1.76
SIN3AQ96ST3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms