Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RNA5SP436-201ENST00000516020 115 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 AC022790.1-201ENST00000522872 204 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 OOSP1P2-201ENST00000579644 351 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 MTND4LP5-201ENST00000605152 292 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 KATNBL1P1-201ENST00000605192 748 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AC234781.2-201ENST00000426370 994 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 HIGD1AP11-201ENST00000438361 280 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AC104581.2-201ENST00000572227 430 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AC124283.4-201ENST00000581815 456 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 VN1R74P-201ENST00000613259 503 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 ZNF876P-202ENST00000398732 1485 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 MTCYBP12-201ENST00000440559 1134 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 COX6CP12-201ENST00000446748 202 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 HMGN1P28-201ENST00000521340 364 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 RAD23BP2-201ENST00000416003 1207 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AL162388.1-201ENST00000450912 352 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AC016727.2-201ENST00000603988 621 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 MTCO1P6-201ENST00000481192 1384 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 FAM35CP-201ENST00000554755 2470 ntBASIC1.37□□□□□ -2.19
CSMD1Q96PZ7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 RNA5SP331-201ENST00000364986 107 ntBASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 MTCO3P30-201ENST00000426425 670 ntBASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 HMGB1P45-201ENST00000435986 653 ntBASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AC036111.3-201ENST00000526389 112 ntBASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 Y_RNA.60-201ENST00000362831 98 ntBASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 RPS27P5-201ENST00000444247 244 ntBASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 RPL23AP29-201ENST00000397284 453 ntBASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AC090255.1-201ENST00000495779 349 ntBASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 AC021087.2-201ENST00000504656 1203 ntBASIC1.36□□□□□ -2.19
CSMD1Q96PZ7 SETP10-201ENST00000424368 814 ntBASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 CR383656.8-201ENST00000549046 145 ntBASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 AC024614.2-201ENST00000577584 372 ntBASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 AL450326.2-201ENST00000421913 1962 ntBASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 AF274854.1-201ENST00000413236 615 ntBASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 OR7L1P-201ENST00000456181 380 ntBASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 SNORA31.11-201ENST00000516528 139 ntBASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 AC068135.2-201ENST00000569293 1028 ntBASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 ZNF271P-202ENST00000465539 1970 ntBASIC1.35□□□□□ -2.19
CSMD1Q96PZ7 Y_RNA.48-201ENST00000362710 103 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 SNORD48-201ENST00000364953 64 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 RNU6-198P-201ENST00000384258 104 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 RNU6-328P-201ENST00000390887 106 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 MTND1P23-201ENST00000416931 372 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 NEK4P1-201ENST00000433383 879 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 HMGB3P26-201ENST00000560051 582 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 AC012150.2-201ENST00000621300 544 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 CKS1BP5-201ENST00000434172 273 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 RPL21P2-201ENST00000440049 481 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 AC096992.1-201ENST00000459808 709 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 AC009541.1-201ENST00000438279 2662 ntBASIC1.34□□□□□ -2.19
CSMD1Q96PZ7 AC006026.1-201ENST00000444025 1803 ntBASIC1.34□□□□□ -2.2
CSMD1Q96PZ7 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
CSMD1Q96PZ7 AC009961.3-201ENST00000449832 765 ntBASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms