Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 RNU6-707P-201ENST00000364647 95 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 SNORA14A-201ENST00000364773 135 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 UBE2V1P2-201ENST00000397758 440 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 HMGN2P35-201ENST00000412164 270 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 BTF3P8-201ENST00000414577 526 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 SSXP9-201ENST00000417503 292 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AL645937.1-202ENST00000421799 937 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 BEND7P1-201ENST00000422058 457 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 PTP4A1P7-201ENST00000423476 514 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 AL135938.1-201ENST00000443141 297 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 COX6CP18-201ENST00000448769 222 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 AP000705.1-201ENST00000454567 350 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 COX7A2P2-201ENST00000505291 250 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
COL21A1Q96P44 HIGD1AP13-201ENST00000509878 289 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC118465.1-201ENST00000513820 1271 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 RNA5SP367-201ENST00000516557 118 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 DEFB130C-202ENST00000530001 230 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC087897.1-201ENST00000550134 156 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 HSPE1P3-201ENST00000559254 309 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 MIR3921-201ENST00000577308 85 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 AL031176.1-201ENST00000604554 466 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AL158211.2-201ENST00000607282 395 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AC124016.2-201ENST00000610058 665 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 AP003476.1-201ENST00000623984 516 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.59□□□□□ -1.99
COL21A1Q96P44 U6.101-201ENST00000637707 76 ntBASIC2.59□□□□□ -1.99
COL21A1Q96P44 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
COL21A1Q96P44 AL136520.1-201ENST00000600311 1322 ntBASIC2.59□□□□□ -2
COL21A1Q96P44 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -2
COL21A1Q96P44 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.59□□□□□ -2
COL21A1Q96P44 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
COL21A1Q96P44 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
COL21A1Q96P44 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.58□□□□□ -2
COL21A1Q96P44 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
COL21A1Q96P44 DEFB108F-201ENST00000344638 222 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
COL21A1Q96P44 RNU6-216P-201ENST00000363282 104 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 RNU6-7-201ENST00000364784 107 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 RNU6-8-201ENST00000365467 107 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COL21A1Q96P44 SNORD21-201ENST00000383953 95 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 SNORA18.3-201ENST00000384122 132 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 RNU6-882P-201ENST00000391025 103 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 RPL19P1-201ENST00000411635 428 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 PSMA6P3-201ENST00000428242 164 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AC079780.1-201ENST00000428259 207 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.58□□□□□ -2
COL21A1Q96P44 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.58□□□□□ -2
COL21A1Q96P44 SEPT7P5-201ENST00000434048 306 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.58□□□□□ -2
COL21A1Q96P44 USP9YP22-201ENST00000438971 294 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AC107083.1-201ENST00000439643 279 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 RPS24P13-201ENST00000442520 397 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AC112653.1-201ENST00000443851 386 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 MRPL50P4-201ENST00000446432 475 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 ST13P20-201ENST00000447996 1065 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.58□□□□□ -2
COL21A1Q96P44 AC090525.1-201ENST00000479116 478 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AC008427.1-201ENST00000503102 655 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.58□□□□□ -2
COL21A1Q96P44 RNU6-1028P-201ENST00000517164 93 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL21A1Q96P44 OR10V3P-201ENST00000525712 725 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 DEFB108D-201ENST00000527787 222 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 NDUFS5P6-201ENST00000529136 295 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AP003066.2-201ENST00000529375 555 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.58□□□□□ -2
COL21A1Q96P44 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.58□□□□□ -2
COL21A1Q96P44 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.58□□□□□ -2
COL21A1Q96P44 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.58□□□□□ -2
COL21A1Q96P44 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.58□□□□□ -2
COL21A1Q96P44 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.58□□□□□ -2
COL21A1Q96P44 AC122134.1-202ENST00000569111 1201 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.58□□□□□ -2
COL21A1Q96P44 AC069545.1-201ENST00000605671 358 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AC007275.1-201ENST00000621243 671 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 AC090897.3-201ENST00000636973 1157 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
COL21A1Q96P44 AC087359.1-201ENST00000508335 1740 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.58□□□□□ -2
COL21A1Q96P44 AP003122.5-201ENST00000527668 3766 ntBASIC2.58□□□□□ -2
COL21A1Q96P44 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COL21A1Q96P44 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms