Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AC007842.1-201ENST00000597336 2039 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 EXOC5P1-201ENST00000510543 1969 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 Y_RNA.44-201ENST00000362676 108 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 RNU6-516P-201ENST00000411381 104 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 FRG2FP-204ENST00000453982 852 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 RPL23AP55-201ENST00000498163 452 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AC074250.1-201ENST00000511117 192 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 IGLVIV-53-201ENST00000520107 367 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 IGHV1-14-201ENST00000523391 241 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AC008962.1-201ENST00000605729 304 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AL591516.1-201ENST00000611326 274 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AC005725.1-201ENST00000577346 2607 ntBASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CNTNAP3BQ96NU0 AC024587.1-201ENST00000505925 2157 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AP000756.2-201ENST00000624168 2567 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 RNU4-44P-201ENST00000363050 141 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 SNORA43.1-201ENST00000364863 140 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 Y_RNA.435-201ENST00000384095 112 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 Y_RNA.488-201ENST00000384403 102 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 RNU1-46P-201ENST00000384425 164 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 U3.36-201ENST00000408418 213 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 RNA5SP107-201ENST00000411358 122 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC092423.1-201ENST00000430165 186 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC007389.2-201ENST00000434630 306 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 OR6D1P-201ENST00000436165 939 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC005094.1-201ENST00000440420 368 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 PPIAP3-201ENST00000450588 505 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 SSXP4-201ENST00000451349 245 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 snoU13.20-201ENST00000459180 104 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 snoU13.22-201ENST00000459428 104 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 RNU6-1219P-201ENST00000516143 112 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 RN7SKP21-201ENST00000516503 220 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC233702.2-202ENST00000562547 291 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC007566.2-201ENST00000603642 413 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC008785.1-201ENST00000624475 456 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC068724.3-201ENST00000625906 87 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 AC100821.1-201ENST00000523153 2479 ntBASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CNTNAP3BQ96NU0 BIN2P1-201ENST00000504996 1530 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC087516.1-201ENST00000561236 2428 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC062022.1-201ENST00000451026 1684 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RN7SKP104-201ENST00000362605 328 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RNA5SP123-201ENST00000363244 119 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RNA5SP505-201ENST00000364748 108 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RNU1-43P-201ENST00000365052 165 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AL359837.1-201ENST00000381357 287 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 SNORD116-18-201ENST00000383961 92 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 MTCYBP2-201ENST00000407745 171 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms