Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AC116353.3-201ENST00000511215 249 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AC093677.1-201ENST00000514414 678 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 SCARNA1-201ENST00000517138 166 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 CYCSP2-201ENST00000558168 301 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 MIR3921-201ENST00000577308 85 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AC093732.2-201ENST00000607950 274 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AC131235.4-201ENST00000609288 620 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 MIR6076-201ENST00000617521 113 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 MIR493-201ENST00000385254 89 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 RPL23AP29-201ENST00000397284 453 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 FAT1P1-201ENST00000406588 507 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 MIR1284-201ENST00000408337 120 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 RNA5SP274-201ENST00000410484 108 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 USP9YP36-201ENST00000424581 829 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 RPL35AP12-201ENST00000425362 338 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 RPL36AP33-201ENST00000450395 310 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 snoU13.8-201ENST00000458890 104 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC117440.1-201ENST00000474107 571 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 FAM172BP-201ENST00000487497 1089 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 SNORD59.2-201ENST00000516873 68 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC022080.3-201ENST00000544433 482 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC090695.1-201ENST00000561269 1222 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC009712.1-201ENST00000564938 316 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC022662.1-201ENST00000580252 331 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 DUXAP10-204ENST00000612052 616 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 ATP5A1P2-202ENST00000616464 443 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 MIR6130-201ENST00000619419 109 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC002550.2-201ENST00000621246 394 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC006111.3-201ENST00000622137 383 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF560Q96MR9 DDX43P2-201ENST00000604753 1354 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 AC103988.1-201ENST00000566382 2177 ntBASIC3.24□□□□□ -1.89
ZNF560Q96MR9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 SNORA1.3-201ENST00000384676 136 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 MTCO2P8-201ENST00000412213 658 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AL953862.1-201ENST00000423016 168 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 MTCO2P23-201ENST00000425216 680 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC022018.1-201ENST00000430685 241 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC004854.1-201ENST00000440356 349 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AL359385.1-201ENST00000456509 365 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 RN7SL20P-201ENST00000488827 297 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AL359273.1-201ENST00000510918 627 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 SNORA31.1-201ENST00000515993 133 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 SNORA31.5-201ENST00000516190 133 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 RN7SKP282-201ENST00000516824 299 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 RNU6-711P-201ENST00000517255 106 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 COX6CP8-201ENST00000522620 226 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC107016.2-201ENST00000547968 190 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AL353997.4-201ENST00000586196 166 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC011451.2-201ENST00000604303 598 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC106052.1-201ENST00000608029 497 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms