Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AC091179.1-201ENST00000461606 579 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 RPL9P9-202ENST00000466501 579 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AC091912.1-201ENST00000511351 248 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 RNU7-4P-201ENST00000516961 62 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 IGKV2D-10-201ENST00000520194 281 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AF279873.1-201ENST00000523393 313 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AC021006.3-201ENST00000530771 192 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AC008083.2-201ENST00000546707 476 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 DUX4L52-201ENST00000549363 777 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AC090115.3-201ENST00000553218 849 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AC109446.1-201ENST00000566172 220 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 MIR4691-201ENST00000583764 85 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 AC025034.2-201ENST00000623264 286 ntBASIC6.1□□□□□ -1.43
TRIM47Q96LD4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM47Q96LD4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 MIR133A2-201ENST00000347538 102 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 RNU6-1020P-201ENST00000363684 107 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 U3.39-201ENST00000408569 239 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 Y_RNA.597-201ENST00000410463 100 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 RHOT1P3-201ENST00000436571 331 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 RPEP5-201ENST00000441137 268 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 AC110792.1-201ENST00000491826 472 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 AC096745.1-201ENST00000509945 370 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 RNU6-1338P-201ENST00000516328 91 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 MIR7853-201ENST00000584820 132 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 U6.106-201ENST00000636360 105 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 AC005005.4-201ENST00000623789 16698 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 AC093311.1-201ENST00000506586 2021 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 HAUS6P2-201ENST00000433254 2404 ntBASIC6.09□□□□□ -1.43
TRIM47Q96LD4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM47Q96LD4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM47Q96LD4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM47Q96LD4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.09□□□□□ -1.44
TRIM47Q96LD4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM47Q96LD4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 RNA5SP455-201ENST00000365190 119 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 RNU6-1127P-201ENST00000384580 107 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 Y_RNA.576-201ENST00000384781 102 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 HSPA8P15-201ENST00000401676 786 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AL445189.1-201ENST00000405722 338 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 RPS16P5-201ENST00000406501 404 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 RNU2-50P-201ENST00000410494 143 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 CEACAMP6-201ENST00000452007 574 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 RN7SL354P-201ENST00000469282 294 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 RPL7P23-201ENST00000493874 747 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AC104806.1-201ENST00000508720 308 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 FTH1P21-201ENST00000512179 511 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 SNORA14.1-201ENST00000516113 141 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 Y_RNA.713-201ENST00000517013 96 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 TOMM20P2-201ENST00000540082 421 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AC026371.1-201ENST00000551867 419 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AC090751.1-201ENST00000566966 267 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 MIR4737-201ENST00000583979 81 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 MIR6758-201ENST00000620653 63 ntBASIC6.08□□□□□ -1.44
TRIM47Q96LD4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms