Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 Y_RNA.490-201ENST00000384413 102 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 MIR23B-201ENST00000384832 97 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AL357515.1-201ENST00000402967 542 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AC024082.2-201ENST00000434771 238 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.89□□□□□ -1.63
SHDQ96IW2 PRPS1P1-201ENST00000445305 876 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AC020550.1-201ENST00000447385 163 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AC090804.1-201ENST00000448870 490 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.89□□□□□ -1.63
SHDQ96IW2 AL049874.2-201ENST00000492636 288 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHDQ96IW2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.89□□□□□ -1.63
SHDQ96IW2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.89□□□□□ -1.63
SHDQ96IW2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.89□□□□□ -1.63
SHDQ96IW2 AC007016.1-201ENST00000512110 244 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.89□□□□□ -1.63
SHDQ96IW2 RN7SKP258-201ENST00000517151 304 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AC008489.1-201ENST00000524271 483 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.89□□□□□ -1.63
SHDQ96IW2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.89□□□□□ -1.63
SHDQ96IW2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.89□□□□□ -1.63
SHDQ96IW2 RN7SL652P-201ENST00000577769 300 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 SNORA74C-1-201ENST00000580726 201 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 VN1R85P-201ENST00000601587 426 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AC092747.3-201ENST00000603769 301 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AC113139.1-201ENST00000605049 239 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AL136964.1-201ENST00000622038 2990 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 AL353748.2-201ENST00000622148 471 ntBASIC4.89□□□□□ -1.63
SHDQ96IW2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SHDQ96IW2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHDQ96IW2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
SHDQ96IW2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHDQ96IW2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHDQ96IW2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SHDQ96IW2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHDQ96IW2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SHDQ96IW2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.88□□□□□ -1.63
SHDQ96IW2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
SHDQ96IW2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHDQ96IW2 RN7SKP145-201ENST00000363291 303 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 RNA5SP515-201ENST00000364570 118 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 RNA5SP235-201ENST00000365411 114 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHDQ96IW2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHDQ96IW2 Y_RNA.387-201ENST00000383918 102 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 SNORA70C-201ENST00000384538 135 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 RNU6-817P-201ENST00000391083 104 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 AC097374.1-203ENST00000400783 485 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 Z98745.1-201ENST00000402553 494 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 POLHP1-201ENST00000411806 470 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 AL591848.1-201ENST00000413092 322 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 RPL7P10-201ENST00000417407 739 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 RPL7L1P10-201ENST00000427790 463 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.88□□□□□ -1.63
SHDQ96IW2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.88□□□□□ -1.63
SHDQ96IW2 AC007677.1-201ENST00000445757 515 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 AL359073.1-201ENST00000448036 403 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 AC000111.2-201ENST00000448200 210 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 RPL23AP24-201ENST00000458203 385 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 RPL23AP2-201ENST00000471227 466 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 AC083904.1-201ENST00000487828 231 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.88□□□□□ -1.63
SHDQ96IW2 RN7SKP60-201ENST00000516985 239 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 MYL12AP1-201ENST00000518490 515 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.88□□□□□ -1.63
SHDQ96IW2 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.88□□□□□ -1.63
SHDQ96IW2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHDQ96IW2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.88□□□□□ -1.63
SHDQ96IW2 AL118558.2-201ENST00000556294 238 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 MIR5699-201ENST00000578903 90 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 AC067852.3-201ENST00000589177 561 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 RNF138P2-201ENST00000603490 592 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHDQ96IW2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHDQ96IW2 MIR6133-201ENST00000617057 108 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHDQ96IW2 AL445363.3-201ENST00000623080 671 ntBASIC4.88□□□□□ -1.63
SHDQ96IW2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SHDQ96IW2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.88□□□□□ -1.63
SHDQ96IW2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.88□□□□□ -1.63
SHDQ96IW2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHDQ96IW2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHDQ96IW2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.88□□□□□ -1.63
SHDQ96IW2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.88□□□□□ -1.63
SHDQ96IW2 ZNF137P-201ENST00000456718 1920 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SHDQ96IW2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHDQ96IW2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHDQ96IW2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SHDQ96IW2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SHDQ96IW2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHDQ96IW2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SHDQ96IW2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.87□□□□□ -1.63
SHDQ96IW2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
SHDQ96IW2 SNORA63-201ENST00000363450 132 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 Y_RNA.474-201ENST00000384341 102 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 EIF4E2P1-201ENST00000393781 255 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms