Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 DDX10P1-201ENST00000448545 1933 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 SNORA69-201ENST00000383895 132 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RNU6-74P-201ENST00000384235 107 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 SNORA37-201ENST00000384504 129 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RNU6-1158P-201ENST00000391167 107 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AL109755.1-201ENST00000401791 649 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RNU6-908P-201ENST00000410160 94 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RNU4-65P-201ENST00000410473 140 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RNU6-712P-201ENST00000410558 100 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RN7SKP159-201ENST00000410657 292 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RNA5SP107-201ENST00000411358 122 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RPS12P23-201ENST00000419579 400 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 GTF2IP20-201ENST00000431663 360 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 USP12PX-201ENST00000432383 1057 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RPL23AP46-201ENST00000438548 490 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RPL21P133-201ENST00000443666 476 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC016696.1-201ENST00000446949 318 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RNU7-63P-201ENST00000459054 62 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RPL23AP2-201ENST00000471227 466 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC105137.1-201ENST00000484355 562 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 RPS27AP13-201ENST00000498403 237 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC025465.4-201ENST00000513422 638 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 SNORA20.3-201ENST00000516880 132 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 IFITM8P-201ENST00000522529 394 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 FAM60DP-201ENST00000524174 632 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC022655.2-201ENST00000577280 318 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 IPO5P1-202ENST00000600039 287 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC020910.2-201ENST00000603635 610 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC007390.2-201ENST00000606229 3803 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC015813.4-201ENST00000610469 179 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 MIR7151-201ENST00000617477 60 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC090337.1-201ENST00000579651 2074 ntBASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 Y_RNA.381-201ENST00000365666 102 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 RNU6-606P-201ENST00000384721 111 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 MIR558-201ENST00000384920 94 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC068050.1-201ENST00000394891 380 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 RNA5SP118-201ENST00000410385 109 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 MED13P1-201ENST00000428342 171 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC004975.1-201ENST00000428733 208 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC016691.1-201ENST00000441321 413 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 SNRPGP6-201ENST00000451124 220 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 NUTF2P7-201ENST00000453086 375 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC007967.1-201ENST00000455422 1159 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 SNORD97-201ENST00000459187 142 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC007537.2-201ENST00000472093 511 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 RPS15AP36-201ENST00000492022 382 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC017037.1-201ENST00000508460 471 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC026801.2-201ENST00000515352 425 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 RNU6-64P-201ENST00000517119 105 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AP001646.1-201ENST00000527936 915 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 CBX3P5-201ENST00000552017 521 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 HIF1AP1-201ENST00000553642 175 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC025884.1-201ENST00000556034 378 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC012669.1-201ENST00000603209 283 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 ARF4P1-201ENST00000605447 541 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 DISC2.1-201ENST00000612827 205 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC130324.3-201ENST00000614165 542 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AL354950.2-201ENST00000617939 290 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 MIR6130-201ENST00000619419 109 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC068831.8-201ENST00000620171 435 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AL136313.1-201ENST00000624804 202 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 AC011266.1-201ENST00000624119 3569 ntBASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms