Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
VPS33AQ96AX1 FAM35BP-202ENST00000497389 3337 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 AC022336.2-201ENST00000568966 2538 ntBASIC3.36□□□□□ -1.87
VPS33AQ96AX1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 CCT4P2-201ENST00000233836 1548 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 MIR141-201ENST00000384975 95 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC110754.1-201ENST00000399740 601 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 SPA17P1-201ENST00000416656 452 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 MRPL50P2-201ENST00000416821 482 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 RSL24D1P6-201ENST00000426934 401 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 LARP1BP3-201ENST00000437229 869 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 RPL7P36-201ENST00000444633 681 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 OR6C5P-201ENST00000452388 923 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 SETP11-201ENST00000473027 690 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC072039.1-201ENST00000477611 581 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 ACTR3BP3-201ENST00000565577 979 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AL606834.2-201ENST00000602954 668 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC091965.4-201ENST00000607691 587 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC103710.4-201ENST00000609301 899 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AP003122.6-201ENST00000623831 495 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 MTND4P16-201ENST00000466108 1367 ntBASIC3.35□□□□□ -1.87
VPS33AQ96AX1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS33AQ96AX1 AC092125.1-201ENST00000562568 1995 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC007823.1-201ENST00000569932 1566 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 FRG1CP-201ENST00000358464 769 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 RNU6-741P-201ENST00000383889 107 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 RPL32P23-201ENST00000397237 405 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 TXNP7-201ENST00000406296 293 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 RNA5SP31-201ENST00000411144 127 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 RNA5SP107-201ENST00000411358 122 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC093578.1-201ENST00000415219 368 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 UBE2FP1-201ENST00000416536 447 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 DBIP2-201ENST00000419076 262 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 HSPE1P1-201ENST00000421494 318 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AL512649.1-201ENST00000428997 581 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 RPL23AP69-201ENST00000431134 458 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 RPS29P7-201ENST00000439662 171 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 MTCO3P45-201ENST00000443036 613 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 CBWD4P-201ENST00000445695 655 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC023598.1-201ENST00000472521 361 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 RPL23AP41-201ENST00000484754 458 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 TTC39CP1-201ENST00000512513 755 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 RNU6-1282P-201ENST00000516735 96 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 RNA5SP380-201ENST00000517190 98 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AP000857.1-201ENST00000532151 543 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AL133153.1-201ENST00000557756 303 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC005951.2-201ENST00000576282 495 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 MIR4307-201ENST00000582802 84 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.34□□□□□ -1.87
VPS33AQ96AX1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC010133.1-201ENST00000615809 842 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms