Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
DDX1Q92499 RPL7P60-201ENST00000397636 735 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 RN7SKP106-201ENST00000410832 272 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 RNU6-516P-201ENST00000411381 104 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.89□□□□□ -1.63
DDX1Q92499 RPS12P23-201ENST00000419579 400 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 NUP35P1-201ENST00000422734 947 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX1Q92499 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX1Q92499 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX1Q92499 RPL35AP22-201ENST00000436855 335 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 HMGB1P18-201ENST00000438801 619 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 RPS17P13-201ENST00000448974 407 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.89□□□□□ -1.63
DDX1Q92499 RNU7-59P-201ENST00000459101 61 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.89□□□□□ -1.63
DDX1Q92499 AL163540.1-201ENST00000485382 386 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 DEFB109F-201ENST00000491870 277 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.89□□□□□ -1.63
DDX1Q92499 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.89□□□□□ -1.63
DDX1Q92499 KLHL2P1-201ENST00000508691 521 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX1Q92499 RNA5SP401-201ENST00000515920 127 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 RNA5SP337-201ENST00000517007 109 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX1Q92499 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX1Q92499 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX1Q92499 DNAJC8P1-201ENST00000554535 372 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX1Q92499 RPL7P50-201ENST00000600588 727 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.89□□□□□ -1.63
DDX1Q92499 AC245389.1-201ENST00000605141 529 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 RNA5SP108-201ENST00000605921 117 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX1Q92499 uc_338.12-201ENST00000616344 181 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 AC090617.10-201ENST00000624308 134 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 AC009161.2-201ENST00000624626 138 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 U3.53-201ENST00000628922 216 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.89□□□□□ -1.63
DDX1Q92499 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
DDX1Q92499 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DDX1Q92499 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
DDX1Q92499 EOGT-210ENST00000615922 1931 ntBASIC4.89□□□□□ -1.63
DDX1Q92499 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
DDX1Q92499 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DDX1Q92499 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX1Q92499 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
DDX1Q92499 AC244517.1-201ENST00000606030 2086 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX1Q92499 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DDX1Q92499 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX1Q92499 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX1Q92499 AC007823.1-201ENST00000569932 1566 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
DDX1Q92499 AC105074.1-201ENST00000623380 3095 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 MIR369-201ENST00000362155 70 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX1Q92499 RNU6-456P-201ENST00000384493 107 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
DDX1Q92499 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX1Q92499 RN7SKP58-201ENST00000411010 305 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 RN7SKP167-201ENST00000411047 285 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.88□□□□□ -1.63
DDX1Q92499 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.88□□□□□ -1.63
DDX1Q92499 AL137014.1-201ENST00000420490 1226 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 BEND7P1-201ENST00000422058 457 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 AC007283.2-201ENST00000424739 197 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX1Q92499 RNU6-329P-201ENST00000459618 107 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.88□□□□□ -1.63
DDX1Q92499 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX1Q92499 RNU6-1170P-201ENST00000515974 106 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX1Q92499 PSMA2P1-201ENST00000526365 646 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 AC011979.2-201ENST00000527568 352 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 AP003072.2-201ENST00000527756 676 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 AP000857.1-201ENST00000532151 543 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 AL133271.1-201ENST00000538229 291 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 PDCD5P1-201ENST00000543528 309 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.88□□□□□ -1.63
DDX1Q92499 AC034105.4-201ENST00000568304 277 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 MIR4742-201ENST00000581069 85 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 HMGB2P1-201ENST00000591146 634 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 AC006254.3-201ENST00000603353 884 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 AL442067.1-201ENST00000613261 223 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX1Q92499 Z95331.1-201ENST00000623075 23112 ntBASIC4.88□□□□□ -1.63
DDX1Q92499 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.88□□□□□ -1.63
DDX1Q92499 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX1Q92499 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DDX1Q92499 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DDX1Q92499 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
DDX1Q92499 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.87□□□□□ -1.63
DDX1Q92499 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.87□□□□□ -1.63
DDX1Q92499 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DDX1Q92499 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
DDX1Q92499 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
DDX1Q92499 OR1S2-201ENST00000302592 978 ntBASIC4.87□□□□□ -1.63
DDX1Q92499 RNU6-1120P-201ENST00000362988 108 ntBASIC4.87□□□□□ -1.63
DDX1Q92499 SNORD113.2-201ENST00000364166 89 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms