Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 MTND1P12-201ENST00000455231 147 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AL583843.1-201ENST00000456070 346 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 Y_RNA.631-201ENST00000459607 101 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC022795.1-201ENST00000473808 480 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 MTND1P3-201ENST00000484956 952 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 RN7SL323P-201ENST00000494712 295 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC026782.1-201ENST00000512952 449 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 RNU6-445P-201ENST00000516949 107 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 SLC2A13P1-201ENST00000531560 322 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC023050.3-201ENST00000541142 333 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC110588.1-201ENST00000559699 137 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC124068.1-201ENST00000563131 678 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC100830.2-201ENST00000581636 240 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC068790.5-201ENST00000602741 355 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 7SK.7-201ENST00000603504 247 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC021646.1-201ENST00000605469 484 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 MIR92B-201ENST00000607575 96 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AL121772.2-201ENST00000614331 297 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 AC009248.2-201ENST00000619826 254 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 NEAT1-202ENST00000501122 22743 ntBASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.75□□□□□ -1.65
SH3RF3Q8TEJ3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 Z73965.1-201ENST00000623412 2297 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 CKAP2P1-201ENST00000555477 2049 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 SNORA62.3-201ENST00000365110 153 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AL450338.1-201ENST00000407987 512 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 RN7SKP140-201ENST00000411196 284 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC113618.1-201ENST00000416747 285 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 MTCYBP8-201ENST00000422855 651 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 RPL30P3-201ENST00000424262 333 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 GTF2IP13-201ENST00000438487 386 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 SEPT14P3-201ENST00000439401 183 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AL732372.2-207ENST00000445840 183 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 SEPT14P2-201ENST00000453405 183 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 RNU6-1208P-201ENST00000459588 107 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 MTCO2P29-201ENST00000465212 189 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC091153.1-201ENST00000466297 402 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 PPIAP15-201ENST00000479662 484 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC006517.1-201ENST00000480485 328 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC090096.1-201ENST00000489168 390 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AP002812.1-201ENST00000495378 474 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AL139099.1-201ENST00000497398 403 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 SEPT14P4-201ENST00000513445 186 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 Y_RNA.672-201ENST00000516289 104 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 Y_RNA.691-201ENST00000516611 103 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC107953.1-201ENST00000522216 297 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 FO082796.1-201ENST00000523795 183 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 COX6CP5-201ENST00000527162 228 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 ZNF705CP-201ENST00000530515 889 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC034105.3-201ENST00000565294 442 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 MIR3682-201ENST00000581338 84 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 NRBF2P1-201ENST00000587407 859 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AL008729.2-201ENST00000606393 473 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC097468.3-201ENST00000607956 456 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AL031666.3-201ENST00000609320 1006 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AL732618.1-201ENST00000623251 301 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AP006248.2-201ENST00000623309 592 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC100810.6-201ENST00000638068 285 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 NMD3P1-201ENST00000439704 1488 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 SCN1A-220ENST00000641603 12506 ntBASIC4.74□□□□□ -1.65
SH3RF3Q8TEJ3 AC006378.2-201ENST00000623178 2476 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 OR5J1P-201ENST00000313544 939 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 RNU6-1309P-201ENST00000363305 108 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms