Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MIR3684-201ENST00000579779 74 ntBASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 AC005191.1-201ENST00000603950 358 ntBASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 AC097467.4-201ENST00000605504 141 ntBASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 RPSAP73-201ENST00000614820 330 ntBASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 TNPO1P2-201ENST00000426249 2665 ntBASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 MSL3P1-202ENST00000440028 1468 ntBASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 PARP4P2-201ENST00000446672 3326 ntBASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SNIP1Q8TAD8 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 ZNF402P-201ENST00000404435 3100 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC110597.1-201ENST00000562669 3176 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 RNA5SP375-201ENST00000362975 119 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 RNVU1-3-201ENST00000364313 161 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 MIR433-201ENST00000384837 93 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 RNU11-201ENST00000387069 134 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 RN7SKP114-201ENST00000410327 279 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 RPL23AP27-201ENST00000415161 451 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC007568.1-201ENST00000422912 471 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 OOSP1P1-201ENST00000423265 274 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 TBCAP1-201ENST00000436520 327 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC005002.2-201ENST00000438228 269 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC234775.1-201ENST00000454247 670 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AL133244.1-201ENST00000456007 258 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 RPL21P6-201ENST00000479171 504 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC024587.1-201ENST00000505925 2157 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 SNORA27.4-201ENST00000516650 95 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 Y_RNA.706-201ENST00000516933 99 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 SNRPGP16-201ENST00000533275 226 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 HMGN2P6-201ENST00000551091 273 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 HMGN2P47-201ENST00000559378 272 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 MIR4679-2-201ENST00000578358 77 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC027229.1-201ENST00000583887 253 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AL360012.1-201ENST00000602813 131 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC006254.2-201ENST00000603259 279 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC009314.1-201ENST00000603871 304 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 Y_RNA.778-201ENST00000620203 90 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC068870.2-201ENST00000620635 389 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AL137067.2-201ENST00000621202 131 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 PANDAR-201ENST00000629595 1506 ntBASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SNIP1Q8TAD8 AC004158.1-201ENST00000564508 4319 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 ZNF826P-207ENST00000622273 1910 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AC140479.2-201ENST00000421567 3130 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 RNU6-1301P-201ENST00000362724 104 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 MIR223-201ENST00000385204 110 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AL353621.1-201ENST00000418219 243 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AL139148.1-201ENST00000427122 680 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 CYCSP51-201ENST00000443545 318 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AC007395.1-201ENST00000451333 677 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 RNU6-1234P-201ENST00000516877 103 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AP005660.1-201ENST00000522972 293 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 IGHV1-14-201ENST00000523391 241 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms