Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RPS4XP13-201ENST00000483219 789 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC026979.1-201ENST00000492525 396 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 RPL30P5-201ENST00000494923 336 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 CEACAMP10-202ENST00000495431 496 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 HMGN1P16-201ENST00000508308 283 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 SNORA14.1-201ENST00000516113 141 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AP000889.2-201ENST00000532684 490 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AL157871.3-201ENST00000557231 293 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 SMIM12P1-201ENST00000603004 274 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC128687.2-201ENST00000609657 566 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AL121612.2-201ENST00000612261 482 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 FAM27E2-201ENST00000619668 403 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC022140.2-201ENST00000623500 188 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC027290.2-201ENST00000623210 18662 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AL359922.3-201ENST00000624779 1670 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 RNU1-134P-201ENST00000362935 165 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 RNU6-371P-201ENST00000364283 108 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 RNA5SP30-201ENST00000365552 115 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 SNORA4.3-201ENST00000365564 137 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 Y_RNA.509-201ENST00000384506 99 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 RNU6-1197P-201ENST00000391183 107 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 RPL21P90-201ENST00000415692 466 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 RPL23AP69-201ENST00000431134 458 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC092001.1-201ENST00000453012 261 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 Z92846.1-201ENST00000456203 268 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC009963.3-201ENST00000458090 486 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 KC877373.1-201ENST00000479066 408 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 RPL12P30-201ENST00000488389 499 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 SUMO2P6-201ENST00000505273 288 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AP003122.3-201ENST00000526316 255 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC084851.1-201ENST00000529105 249 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AL352979.3-201ENST00000553515 247 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC138207.8-204ENST00000579588 527 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 MIR4260-201ENST00000583107 67 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC012119.1-201ENST00000603184 222 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 ATP1B3P1-201ENST00000605365 821 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 MIR4727-201ENST00000622232 55 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 AC048347.1-201ENST00000624621 427 ntBASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLRN3Q8NCR9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 Y_RNA.33-201ENST00000362591 102 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 Y_RNA.184-201ENST00000363884 108 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 Y_RNA.535-201ENST00000384612 99 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 SNORA66-201ENST00000384792 133 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AL031985.1-201ENST00000392713 418 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 HSPE1P26-201ENST00000405341 275 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 RPS4XP7-201ENST00000406274 780 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 RN7SKP216-201ENST00000411050 312 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms