Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AL691449.1-201ENST00000426570 421 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC073464.1-201ENST00000429823 534 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC104850.1-201ENST00000435940 476 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AL662791.1-201ENST00000441992 928 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 NFU1P2-201ENST00000448700 469 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 RPL29P29-201ENST00000448725 423 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AP1S2P1-201ENST00000457344 379 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 RPL21P103-201ENST00000479921 488 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC007182.2-201ENST00000489251 402 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC114967.1-201ENST00000504890 259 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 MTCO3P44-201ENST00000510977 541 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC093853.1-201ENST00000515689 483 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC090877.1-201ENST00000561418 344 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AL845331.3-202ENST00000562856 261 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC090615.1-201ENST00000577519 154 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC006504.3-201ENST00000586818 523 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC011816.2-201ENST00000607089 556 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC091905.1-201ENST00000624400 311 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 AC019226.1-201ENST00000625666 515 ntBASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLIP4Q8N3C7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 Y_RNA.1-201ENST00000352915 104 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 RNY4P14-201ENST00000363656 96 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 RNVU1-3-201ENST00000364313 161 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 Y_RNA.402-201ENST00000383972 102 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 RNU6-1103P-201ENST00000384150 107 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 RNU6-780P-201ENST00000391030 104 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC005517.2-201ENST00000424673 553 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC002075.2-201ENST00000425207 252 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 ELOCP14-201ENST00000428070 331 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC002486.1-201ENST00000435098 391 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 ELOCP7-201ENST00000439968 331 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 snoU13.8-201ENST00000458890 104 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC026979.1-201ENST00000492525 396 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 ARL4AP2-201ENST00000507378 601 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC118273.2-201ENST00000532092 465 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AK6P1-201ENST00000540219 478 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 LLPHP1-201ENST00000603571 367 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC121334.2-201ENST00000605387 271 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC055876.5-201ENST00000605667 259 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 MIR98-201ENST00000606724 119 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 RNU4-89P-201ENST00000607443 133 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 AC104458.1-201ENST00000608243 463 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 BX664608.1-201ENST00000610519 487 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 MIR6716-201ENST00000613413 80 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 MIR6758-201ENST00000620653 63 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 MIR6830-201ENST00000636015 70 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 MFSD8-236ENST00000641509 4050 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 ZNF734P-201ENST00000419494 1534 ntBASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLIP4Q8N3C7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 RNU6-181P-201ENST00000363225 107 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 Y_RNA.234-201ENST00000364409 97 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 Y_RNA.303-201ENST00000364998 94 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 RNU6-339P-201ENST00000384310 107 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 RPL23AP32-201ENST00000395315 459 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL022722.2-201ENST00000402519 180 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms